Evidence map›Paper›PMID 26287547›Full record

ArticlePloS one2015

A New Role for LOC101928437 in Non-Syndromic Intellectual Disability: Findings from a Family-Based Association Test.

Shaohe Zhou, Zhangyan Shi, Meng Cui, Junlin Li, Zhe Ma, Yuanyu Shi, Zijian Zheng, Fuchang Zhang, Tianbo Jin, Tingting Geng and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 1 country.

Shaohe ZhouKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China.
Zhangyan ShiKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China.
Meng CuiXi'an Institute of Mental Health, Xi'an, China.
Junlin LiKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China.
Zhe MaKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China.
Yuanyu ShiKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China.
Zijian ZhengCollege of Public Management, Institute of Application Psychology, Northwest University, Xi'an, China.
Fuchang ZhangKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China; College of Public Management, Institute of Application Psychology, Northwest University, Xi'an, China.
Tianbo JinSchool of Life Sciences, Northwest University, Xi'an, Shaanxi, China; National Engineering Research Center for Miniaturized Detection Systems, Xi'an, Shaanxi, China.
Tingting GengSchool of Life Sciences, Northwest University, Xi'an, Shaanxi, China; National Engineering Research Center for Miniaturized Detection Systems, Xi'an, Shaanxi, China.
Chao ChenSchool of Life Sciences, Northwest University, Xi'an, Shaanxi, China; National Engineering Research Center for Miniaturized Detection Systems, Xi'an, Shaanxi, China.
Yale GuoThe 2nd Affiliated Hospital, Xi'an Jiaotong University, Xi'an, China.
Jianping ZhouThe 2nd Affiliated Hospital, Xi'an Jiaotong University, Xi'an, China.
Shaoping HuangThe 2nd Affiliated Hospital, Xi'an Jiaotong University, Xi'an, China.
Xingli GuoSchool of Computer Science and Technology, Xidian University, Xi'an Shaanxi, China.
Lin GaoSchool of Computer Science and Technology, Xidian University, Xi'an Shaanxi, China.
Pingyuan GongLaboratory of Medical Molecular Biology, Henan University of Science and Technology, Luoyang, China.
Xiaocai GaoKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China; College of Public Management, Institute of Application Psychology, Northwest University, Xi'an, China.
Kejin ZhangKey Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), College of Life Science, Institute of Population and Health, Northwest University, Xi'an, China.
Northwest University · CNMinistry of Education of the People's Republic of China · CNSecond Affiliated Hospital of Xi'an Jiaotong University · CNXidian University · CNFirst Affiliated Hospital of Xi'an Jiaotong University · CNHenan University of Science and Technology · CNXian Mental Health Center · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-syndromic intellectual disability (NSID) is mental retardation in persons of normal physical appearance who have no recognisable features apart from obvious deficits in intellectual functioning and adaptive ability; however, its genetic etiology of most patients has remained unknown. The main purpose of this study was to fine map and identify specific causal gene(s) by genotyping a NSID family cohort using a panel of markers encompassing a target region reported in a previous work. A total of 139 families including probands, parents and relatives were included in the household survey, clinical examinations and intelligence tests, recruited from the Qinba mountain region of Shannxi province, western China. A collection of 34 tagged single nucleotide polymorphisms (tSNPs) spanning five microsatellite marker (STR) loci were genotyped using an iPLEX Gold assay. The association between tSNPs and patients was analyzed by family-based association testing (FBAT) and haplotype analysis (HBAT). Four markers (rs5974392, rs12164331, rs5929554 and rs3116911) in a block that showed strong linkage disequilibrium within the first three introns of the LOC101928437 locus were found to be significantly associated with NSID (all P<0.01) by the FBAT method for a single marker in additive, dominant and recessive models. The results of haplotype tests of this block also revealed a significant association with NSID (all P<0.05) using 2-window and larger HBAT analyses. These results suggest that LOC101928437 is a novel candidate gene for NSID in Han Chinese individuals of the Qinba region of China. Although the biological function of the gene has not been well studied, knowledge about this gene will provide insights that will increase our understanding of NSID development.

Indexed as

Genetic Predisposition to DiseaseAdolescentAdultAgedAsian PeopleChildChild, PreschoolChinaFamilyFemaleGene FrequencyGenetic Association StudiesGenetic MarkersHaplotypesHumansIntellectual DisabilityGenetic MarkersRNA, Untranslated

Identifiers

PMID26287547
PMCPMC4545728
OpenAlexW1876001475

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.