Evidence map›Paper›PMID 26285820›Full record

ArticleBMC microbiology2015

Contribution of the non-effector members of the HrpL regulon, iaaL and matE, to the virulence of Pseudomonas syringae pv. tomato DC3000 in tomato plants.

Melissa G Castillo-Lizardo, Isabel M Aragón, Vivian Carvajal, Isabel M Matas, María Luisa Pérez-Bueno, María-Trinidad Gallegos, Matilde Barón, Cayo Ramos

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Pseudomonas syringae: what it takes to be a pathogen.Nature reviews. Microbiology · 2018
    Review
  11. Article
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Melissa G Castillo-LizardoÁrea de Genética, Universidad de Málaga, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-CSIC (IHSM-UMA-CSIC), Campus de Teatinos, 29071, Málaga, Spain.
Isabel M AragónÁrea de Genética, Universidad de Málaga, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-CSIC (IHSM-UMA-CSIC), Campus de Teatinos, 29071, Málaga, Spain.
Vivian CarvajalEstación Experimental del Zaidín, CSIC (EEZ-CSIC), Profesor Albareda 1, 18008, Granada, Spain.
Isabel M MatasÁrea de Genética, Universidad de Málaga, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-CSIC (IHSM-UMA-CSIC), Campus de Teatinos, 29071, Málaga, Spain.
María Luisa Pérez-BuenoEstación Experimental del Zaidín, CSIC (EEZ-CSIC), Profesor Albareda 1, 18008, Granada, Spain.
María-Trinidad GallegosEstación Experimental del Zaidín, CSIC (EEZ-CSIC), Profesor Albareda 1, 18008, Granada, Spain.
Matilde BarónEstación Experimental del Zaidín, CSIC (EEZ-CSIC), Profesor Albareda 1, 18008, Granada, Spain.
Cayo RamosÁrea de Genética, Universidad de Málaga, Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora", Universidad de Málaga-CSIC (IHSM-UMA-CSIC), Campus de Teatinos, 29071, Málaga, Spain. crr@uma.es.
Consejo Superior de Investigaciones Científicas · ESInstituto de Hortofruticultura Subtropical y Mediterránea "La Mayora" · ESGerman Center for Neurodegenerative Diseases · DEUniversidad Publica de Navarra · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe phytohormone indole-3-acetic acid (IAA) is widely distributed among plant-associated bacteria. Certain strains of the Pseudomonas syringae complex can further metabolize IAA into a less biologically active amino acid conjugate, 3-indole-acetyl-ε-L-lysine, through the action of the iaaL gene. In P. syringae and Pseudomonas savastanoi strains, the iaaL gene is found in synteny with an upstream gene, here called matE, encoding a putative MATE family transporter. In P. syringae pv. tomato (Pto) DC3000, a pathogen of tomato and Arabidopsis plants, the HrpL sigma factor controls the expression of a suite of virulence-associated genes via binding to hrp box promoters, including that of the iaaL gene. However, the significance of HrpL activation of the iaaL gene in the virulence of Pto DC3000 is still unclear.

resultsA conserved hrp box motif is found upstream of the iaaL gene in the genomes of P. syringae strains. However, although the promoter region of matE is only conserved in genomospecies 3 of this bacterial group, we showed that this gene also belongs to the Pto DC3000 HrpL regulon. We also demonstrated that the iaaL gene is transcribed both independently and as part of an operon with matE in this pathogen. Deletion of either the iaaL or the matE gene resulted in reduced fitness and virulence of Pto DC3000 in tomato plants. In addition, we used multicolor fluorescence imaging to visualize the responses of tomato plants to wild-type Pto DC3000 and to its ΔmatE and ΔiaaL mutants. Activation of secondary metabolism prior to the development of visual symptoms was observed in tomato leaves after bacterial challenges with all strains. However, the observed changes were strongest in plants challenged by the wild-type strain, indicating lower activation of secondary metabolism in plants infected with the ΔmatE or ΔiaaL mutants.

conclusionsOur results provide new evidence for the roles of non-type III effector genes belonging to the Pto DC3000 HrpL regulon in virulence.

Indexed as

RegulonBacterial ProteinsDNA-Binding ProteinsPlant DiseasesPseudomonas syringaeSigma FactorSolanum lycopersicumVirulenceVirulence FactorsBacterial ProteinsDNA-Binding ProteinsHrpL protein, Pseudomonas syringaeSigma FactorVirulence Factors

Identifiers

PMID26285820
PMCPMC4544800
OpenAlexW1832500507

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.