Evidence map›Paper›PMID 26285052›Full record

ArticleIEEE transactions on bio-medical engineering2016

A Minimum Spanning Forest-Based Method for Noninvasive Cancer Detection With Hyperspectral Imaging.

Robert Pike, Guolan Lu, Dongsheng Wang, Zhuo Georgia Chen, Baowei Fei

Abstract read
In one paragraph

Article in IEEE transactions on bio-medical engineering, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Development of a new polarized hyperspectral imaging microscope.Proceedings of SPIE--the International Society for Optical Engineering · 2020
    Article
  12. Proceedings of SPIE--the International Society for Optical Engineering · 2020
    Article
  13. Review
  14. Article
  15. Review
  16. Deep Learning-Based Framework forSensors (Basel, Switzerland) · 2019
    Article
  17. Surgical Aid Visualization System for Glioblastoma Tumor Identification based on Deep Learning andProceedings of SPIE--the International Society for Optical Engineering · 2019
    Article
  18. Adaptive deep learning for head and neck cancer detection using hyperspectral imaging.Visual computing for industry, biomedicine, and art · 2019
    Article
  19. Article
  20. [Hyperspectral imaging of gastrointestinal anastomoses].Der Chirurg; Zeitschrift fur alle Gebiete der operativen Medizen · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Robert Pike
Guolan Lu
Dongsheng Wang
Zhuo Georgia Chen
Baowei Fei

Funding

TARGETING DEATH RECEPTOR-MEDIATED APOPTOSIS FOR HEAD AND NECK CANCERP50CA128613 · NCI · EMORY UNIVERSITY · PI ROGATKO, ANDRE · 2007 to 2011
$12.0M
uPAR Targeted in Vivo Molecular Magnetic Resonance Imaging of....P50CA128301 · NCI · EMORY UNIVERSITY · PI SCHUSTER, DAVID MICHAEL · 2008 to 2012
$6.8M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
Targeted fusion biopsy using anti-[18F]FACBC PET/CT and real-time 3D ultrasound gR21CA176684 · NCI · EMORY UNIVERSITY · PI FEI, BAOWEI, MASTER, VIRAJ · 2013 to 2014
$568k
NCI NIH HHS P50 CA128301NCI NIH HHS P50CA128301NCI NIH HHS P50 CA128613NCI NIH HHS P50CA128613NCI NIH HHS R01 CA156775NCI NIH HHS R01CA156775NCI NIH HHS R21 CA176684NCI NIH HHS R21CA176684
6 · The paper itself

Abstract

goalThe purpose of this paper is to develop a classification method that combines both spectral and spatial information for distinguishing cancer from healthy tissue on hyperspectral images in an animal model.

methodsAn automated algorithm based on a minimum spanning forest (MSF) and optimal band selection has been proposed to classify healthy and cancerous tissue on hyperspectral images. A support vector machine classifier is trained to create a pixel-wise classification probability map of cancerous and healthy tissue. This map is then used to identify markers that are used to compute mutual information for a range of bands in the hyperspectral image and thus select the optimal bands. An MSF is finally grown to segment the image using spatial and spectral information.

conclusionThe MSF based method with automatically selected bands proved to be accurate in determining the tumor boundary on hyperspectral images. SIGNIFICANCE: Hyperspectral imaging combined with the proposed classification technique has the potential to provide a noninvasive tool for cancer detection.

Indexed as

Support Vector MachineAnimalsDecision TreesFemaleFluorescent DyesImage Interpretation, Computer-AssistedMiceNeoplasmsOptical ImagingFluorescent Dyes

Identifiers

PMID26285052
PMCPMC4791052

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.