Evidence map›Paper›PMID 26284702›Full record

ArticleAmerican journal of medical genetics. Part A2015

Exome analysis of a family with Wolff-Parkinson-White syndrome identifies a novel disease locus.

Neil E Bowles, Chuanchau J Jou, Cammon B Arrington, Brett J Kennedy, Aubree Earl, Norisada Matsunami, Lindsay L Meyers, Susan P Etheridge, Elizabeth V Saarel, Steven B Bleyl and 6 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Significance of α-Myosin Heavy Chain (Journal of cardiovascular development and disease · 2022
    Article
  5. Article
  6. Expanding the phenotype of CACNA1C mutation disorders.Molecular genetics & genomic medicine · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. ArrhythmoGenoPharmacoTherapy.Frontiers in pharmacology · 2020
    Review
  11. Article
  12. Article
  13. IDENTIFYING NEW SUDDEN DEATH GENES.Transactions of the American Clinical and Climatological Association · 2018
    Article
  14. Applications of the 1000 Genomes Project resources.Briefings in functional genomics · 2017
    Article
  15. The Human Phenotype Ontology in 2017.Nucleic acids research · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Neil E BowlesDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Chuanchau J JouDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Cammon B ArringtonDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Brett J KennedyDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah.
Aubree EarlDepartment of Cardiothoracic Surgery, University of Utah School of Medicine, Salt Lake City, Utah.
Norisada MatsunamiDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah.
Lindsay L MeyersDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Susan P EtheridgeDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Elizabeth V SaarelDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Steven B BleylDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
H Joseph YostDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, Salt Lake City, Utah.
Mark YandellDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah.
Mark F LeppertDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah.
Martin Tristani-FirouziDepartment of Pediatrics, Division of Cardiology, University of Utah School of Medicine, Salt Lake City, Utah.
Peter J GruberDepartment of Cardiothoracic Surgery, University of Utah School of Medicine, Salt Lake City, Utah.
Baylor Hopkins Centers for Mendelian Genomics
University of Utah · USIntermountain Healthcare · US

Funding

VIRAL DAMAGE TO BRAIN AND NEUROMUSCULAR SYSTEMM01RR000064 · NCRR · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 1985 to 2008
$21.7M
University of Utah Center for Clinical and Translational ScienceUL1TR001067 · NCATS · UNIVERSITY OF UTAH · PI DERE, WILLARD H., HESS, RACHEL · 2013 to 2017
$19.8M
Baylor-Johns Hopkins Center for Mendelian GeneticsU54HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2012 to 2015
$15.6M
VAAST+: Tool for variant prioritization, risk assessment and disease-gene findingR01GM104390 · NIGMS · UNIVERSITY OF UTAH · PI JORDE, LYNN, YANDELL, MARK DOUGLAS · 2013 to 2017
$2.2M
Clinical Genome Inference System: Variant Prioritization for Clinical DiagnosticsR44HG006579 · NHGRI · FABRIC GENOMICS INC. · PI REESE, MARTIN G, YANDELL, MARK DOUGLAS · 2012 to 2013
$1.8M
University of Utah Center for clinical and Translational ScienceTL1TR001066 · NCATS · UNIVERSITY OF UTAH · PI DERE, WILLARD H., HESS, RACHEL · 2013 to 2017
$558k
NCATS NIH HHS TL1 TR001066NCATS NIH HHS UL1 TR001067NCRR NIH HHS M01 RR000064NCRR NIH HHS M01-RR00064NHGRI NIH HHS R44 HG006579NHGRI NIH HHS R44HG006579NHGRI NIH HHS U54 HG006542NHGRI NIH HHS U54HG006542NHLBI NIH HHS 1X01HL115006NIGMS NIH HHS R01 GM104390NIGMS NIH HHS R01GM104390
6 · The paper itself

Abstract

Wolff-Parkinson-White (WPW) syndrome is a common cause of supraventricular tachycardia that carries a risk of sudden cardiac death. To date, mutations in only one gene, PRKAG2, which encodes the 5'-AMP-activated protein kinase subunit γ-2, have been identified as causative for WPW. DNA samples from five members of a family with WPW were analyzed by exome sequencing. We applied recently designed prioritization strategies (VAAST/pedigree VAAST) coupled with an ontology-based algorithm (Phevor) that reduced the number of potentially damaging variants to 10: a variant in KCNE2 previously associated with Long QT syndrome was also identified. Of these 11 variants, only MYH6 p.E1885K segregated with the WPW phenotype in all affected individuals and was absent in 10 unaffected family members. This variant was predicted to be damaging by in silico methods and is not present in the 1,000 genome and NHLBI exome sequencing project databases. Screening of a replication cohort of 47 unrelated WPW patients did not identify other likely causative variants in PRKAG2 or MYH6. MYH6 variants have been identified in patients with atrial septal defects, cardiomyopathies, and sick sinus syndrome. Our data highlight the pleiotropic nature of phenotypes associated with defects in this gene.

Indexed as

ExomeAdultAMP-Activated Protein KinasesCardiac MyosinsFemaleGenetic LociHumansMaleMyosin Heavy ChainsPedigreePotassium Channels, Voltage-GatedWolff-Parkinson-White SyndromeAMP-Activated Protein KinasesCardiac MyosinsKCNE2 protein, humanMYH6 protein, humanMyosin Heavy ChainsPotassium Channels, Voltage-GatedPRKAG2 protein, humanMYH6whole exome sequencingWolff-Parkinson-White

Identifiers

PMID26284702
PMCPMC4896306
OpenAlexW2124213309

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.