Evidence map›Paper›PMID 26284057›Full record

ReviewFrontiers in microbiology2015

Biocontrol mechanism by root-associated Bacillus amyloliquefaciens FZB42 - a review.

Soumitra Paul Chowdhury, Anton Hartmann, XueWen Gao, Rainer Borriss

Abstract readReview
In one paragraph

Review in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 248 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
248citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

248 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Bacilli the most important biocontrol agent in Brazilian agriculture: from mechanisms of action to market adoption.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Review
  3. Article
  4. ZnO Nanoparticles Enhance the Biocontrol Efficacy ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Article
  7. MultifunctionalJournal of fungi (Basel, Switzerland) · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Habitat-Adapted EndophyticMicroorganisms · 2026
    Article
  14. Biocontrol Potential and Functional Characteristics ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  15. Journal of bacteriology · 2026
    Review
  16. Biotechnology reports (Amsterdam, Netherlands) · 2026
    Article
  17. Article
  18. Review
  19. Multifunctional Bioactivity ofCurrent issues in molecular biology · 2026
    Article
  20. Review

188 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Soumitra Paul ChowdhuryHelmholtz Zentrum München - German Research Center for Environmental Health (GmbH), Research Unit Microbe-Plant Interactions Neuherberg, Germany.
Anton HartmannHelmholtz Zentrum München - German Research Center for Environmental Health (GmbH), Research Unit Microbe-Plant Interactions Neuherberg, Germany.
XueWen GaoCollege of Plant Protection, Nanjing Agricultural University Nanjing, China ; Key Laboratory of Monitoring and Management of Crop Disease and Pest Insects, Ministry of Agriculture Nanjing, China.
Rainer BorrissABiTEP GmbH Berlin, Germany ; Fachgebiet Phytomedizin, Institut für Agrar- und Gartenbauwissenschaften, Humboldt-Universität zu Berlin Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacillus amyloliquefaciens subsp. plantarum FZB42 is a Gram-positive model bacterium for unraveling plant-microbe interactions in Bacilli. In addition, FZB42 is used commercially as biofertilizer and biocontrol agent in agriculture. Genome analysis of FZB42 revealed that nearly 10% of the FZB42 genome is devoted to synthesizing antimicrobial metabolites and their corresponding immunity genes. However, recent investigations in planta demonstrated that - except surfactin - the amount of such compounds found in vicinity of plant roots is relatively low, making doubtful a direct function in suppressing competing microflora including plant pathogens. These metabolites have been also suspected to induce changes within the rhizosphere microbial community, which might affect environment and plant health. However, sequence analysis of rhizosphere samples revealed only marginal changes in the root microbiome, suggesting that secondary metabolites are not the key factor in protecting plants from pathogenic microorganisms. On the other hand, adding FZB42 to plants compensate, at least in part, changes in the community structure caused by the pathogen, indicating an interesting mechanism of plant protection by beneficial Bacilli. Sub-lethal concentrations of cyclic lipopeptides and volatiles produced by plant-associated Bacilli trigger pathways of induced systemic resistance (ISR), which protect plants against attacks of pathogenic microbes, viruses, and nematodes. Stimulation of ISR by bacterial metabolites is likely the main mechanism responsible for biocontrol action of FZB42.

Indexed as

Bacillus amyloliquefaciens plantarumFZB42induced systemic resistance (ISR)non-ribosomal synthesized lipopeptides (NRPS)non-ribosomal synthesized polyketides (PKS)plant growth promoting bacteria (PGPR)volatiles

Identifiers

PMID26284057
PMCPMC4517070

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.