Evidence map›Paper›PMID 26284052›Full record

ArticleFrontiers in microbiology2015

Hha has a defined regulatory role that is not dependent upon H-NS or StpA.

Carla Solórzano, Shabarinath Srikumar, Rocío Canals, Antonio Juárez, Sonia Paytubi, Cristina Madrid

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Invasiveness ofPathogens (Basel, Switzerland) · 2021
    Article
  5. PchE Regulation ofInternational journal of molecular sciences · 2020
    Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Carla SolórzanoDepartament de Microbiologia, Universitat de Barcelona Barcelona, Spain.
Shabarinath SrikumarInstitute of Integrative Biology, University of Liverpool Liverpool, UK.
Rocío CanalsInstitute of Integrative Biology, University of Liverpool Liverpool, UK.
Antonio JuárezDepartament de Microbiologia, Universitat de Barcelona Barcelona, Spain ; Institut de Bioenginyeria de Catalunya, Parc Científic de Barcelona Barcelona, Spain.
Sonia PaytubiDepartament de Microbiologia, Universitat de Barcelona Barcelona, Spain.
Cristina MadridDepartament de Microbiologia, Universitat de Barcelona Barcelona, Spain.
Universitat de Barcelona · ESUniversity of Liverpool · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Hha family of proteins is involved in the regulation of gene expression in enterobacteria by forming complexes with H-NS-like proteins. Whereas several amino acid residues of both proteins participate in the interaction, some of them play a key role. Residue D48 of Hha protein is essential for the interaction with H-NS, thus the D48N substitution in Hha protein abrogates H-NS/Hha interaction. Despite being a paralog of H-NS protein, StpA interacts with HhaD48N with higher affinity than with the wild type Hha protein. To analyze whether Hha is capable of acting independently of H-NS and StpA, we conducted transcriptomic analysis on the hha and stpA deletion strains and the hhaD48N substitution strain of Salmonella Typhimurium using a custom microarray. The results obtained allowed the identification of 120 genes regulated by Hha in an H-NS/StpA-independent manner, 38% of which are horizontally acquired genes. A significant number of the identified genes are involved in functions related to cell motility, iron uptake, and pathogenicity. Thus, motility assays, siderophore detection and intra-macrophage replication assays were performed to confirm the transcriptomic data. Our findings point out the importance of Hha protein as an independent regulator in S. Typhimurium, highlighting a regulatory role on virulence.

Indexed as

gene regulationHhaH-NSmotilitypathogenicity islandSalmonellaStpA

Identifiers

PMID26284052
PMCPMC4519777
OpenAlexW1500824506

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.