Evidence map›Paper›PMID 26283921›Full record

ArticleFrontiers in cellular neuroscience2015

Assessing effects on dendritic arborization using novel Sholl analyses.

Kate M O'Neill, Barbara F Akum, Survandita T Dhawan, Munjin Kwon, Christopher G Langhammer, Bonnie L Firestein

Abstract read
In one paragraph

Article in Frontiers in cellular neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Dendritogenic Potential of the Ethanol Extract fromMolecules (Basel, Switzerland) · 2023
    Article
  11. Article
  12. Vesicular Glutamate Release from Feeder-FreehiPSC-Derived Neurons.International journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Adult trkB Signaling in Parvalbumin Interneurons is Essential to Prefrontal Network Dynamics.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  17. Deficiency of Intellectual Disability-Related GeneFrontiers in cell and developmental biology · 2021
    Article
  18. Adult Mouse Retina Explants: FromFrontiers in molecular neuroscience · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kate M O'NeillDepartment of Cell Biology and Neuroscience, Rutgers University Piscataway, NJ, USA ; Graduate Program in Biomedical Engineering, Rutgers University Piscataway, NJ, USA.
Barbara F AkumDepartment of Cell Biology and Neuroscience, Rutgers University Piscataway, NJ, USA.
Survandita T DhawanDepartment of Cell Biology and Neuroscience, Rutgers University Piscataway, NJ, USA.
Munjin KwonDepartment of Cell Biology and Neuroscience, Rutgers University Piscataway, NJ, USA.
Christopher G LanghammerDepartment of Cell Biology and Neuroscience, Rutgers University Piscataway, NJ, USA.
Bonnie L FiresteinDepartment of Cell Biology and Neuroscience, Rutgers University Piscataway, NJ, USA.

Funding

UMDNJ TRAINING GRANT IN BIOTECHNOLOGYT32GM008339 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI YARMUSH, MARTIN L · 1989 to 2019
$6.1M
NIGMS NIH HHS T32 GM008339
6 · The paper itself

Abstract

Determining the shape of cell-specific dendritic arbors is a tightly regulated process that occurs during development. When this regulation is aberrant, which occurs during disease or injury, alterations in dendritic shape result in changes to neural circuitry. There has been significant progress on characterizing extracellular and intrinsic factors that regulate dendrite number by our laboratory and others. Generally, changes to the dendritic arbor are assessed by Sholl analysis or simple dendrite counting. However, we have found that this general method often overlooks local changes to the arbor. Previously, we developed a program (titled Bonfire) to facilitate digitization of neurite morphology and subsequent Sholl analysis and to assess changes to root, intermediate, and terminal neurites. Here, we apply these different Sholl analyses, and a novel Sholl analysis, to uncover previously unknown changes to the dendritic arbor when we overexpress an important regulator of dendrite branching, cytosolic PSD-95 interactor (cypin), at two developmental time points. Our results suggest that standard Sholl analysis and simple dendrite counting are not sufficient for uncovering local changes to the dendritic arbor.

Indexed as

dendriteimage analysismorphologyneuronSholltracing

Identifiers

PMID26283921
PMCPMC4519774

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.