Evidence map›Paper›PMID 26283789›Full record

ArticleThe Journal of biological chemistry2015

Cyclic diGMP regulates production of sortase substrates of Clostridium difficile and their surface exposure through ZmpI protease-mediated cleavage.

Johann Peltier, Helen A Shaw, Edward C Couchman, Lisa F Dawson, Lu Yu, Jyoti S Choudhary, Volkhard Kaever, Brendan W Wren, Neil F Fairweather

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 64 citations in OpenAlex.

  1. Nanoluciferase-Based Reporters for Clostridioides difficile.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Article
  3. The current riboswitch landscape inMicrobiology (Reading, England) · 2024
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. An RNA-centric global view ofProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  12. Article
  13. Article
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  15. Article
  16. Article
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  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Johann PeltierFrom the Department of Life Sciences, Center for Molecular Bacteriology and Infection, Imperial College London, London SW7 2AZ, United Kingdom.
Helen A ShawFrom the Department of Life Sciences, Center for Molecular Bacteriology and Infection, Imperial College London, London SW7 2AZ, United Kingdom.
Edward C CouchmanFrom the Department of Life Sciences, Center for Molecular Bacteriology and Infection, Imperial College London, London SW7 2AZ, United Kingdom.
Lisa F Dawsonthe Department of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, London WC1E 7HT, United Kingdom.
Lu Yuthe Wellcome Trust Sanger Institute, Hinxton CB10 1SA, United Kingdom, and.
Jyoti S Choudharythe Wellcome Trust Sanger Institute, Hinxton CB10 1SA, United Kingdom, and.
Volkhard Kaeverthe Research Core Unit Metabolomics, Hannover Medical School, Hannover D-30625, Germany.
Brendan W Wrenthe Department of Pathogen Molecular Biology, London School of Hygiene and Tropical Medicine, London WC1E 7HT, United Kingdom.
Neil F FairweatherFrom the Department of Life Sciences, Center for Molecular Bacteriology and Infection, Imperial College London, London SW7 2AZ, United Kingdom, n.fairweather@imperial.ac.uk.ORCID http://orcid.org/0000-0002-3224-0207
Imperial College London · GBUniversity of London · GBWellcome Sanger Institute · GBMedizinische Hochschule Hannover · DE

Funding

Medical Research Council G0800170Medical Research Council G1000214
6 · The paper itself

Abstract

In Gram-positive pathogens, surface proteins may be covalently anchored to the bacterial peptidoglycan by sortase, a cysteine transpeptidase enzyme. In contrast to other Gram-positive bacteria, only one single sortase enzyme, SrtB, is conserved between strains of Clostridium difficile. Sortase-mediated peptidase activity has been reported in vitro, and seven potential substrates have been identified. Here, we demonstrate the functionality of sortase in C. difficile. We identify two sortase-anchored proteins, the putative adhesins CD2831 and CD3246, and determine the cell wall anchor structure of CD2831. The C-terminal PPKTG sorting motif of CD2831 is cleaved between the threonine and glycine residues, and the carboxyl group of threonine is amide-linked to the side chain amino group of diaminopimelic acid within the peptidoglycan peptide stem. We show that CD2831 protein levels are elevated in the presence of high intracellular cyclic diGMP (c-diGMP) concentrations, in agreement with the control of CD2831 expression by a c-diGMP-dependent type II riboswitch. Low c-diGMP levels induce the release of CD2831 and presumably CD3246 from the surface of cells. This regulation is mediated by proteolytic cleavage of CD2831 and CD3246 by the zinc metalloprotease ZmpI, whose expression is controlled by a type I c-diGMP riboswitch. These data reveal a novel regulatory mechanism for expression of two sortase substrates by the secondary messenger c-diGMP, on which surface anchoring is dependent.

Indexed as

Gene Expression Regulation, BacterialAdhesins, BacterialAmino Acid MotifsAminoacyltransferasesBacterial ProteinsCell MembraneCell WallClostridioides difficileCyclic GMPCysteine EndopeptidasesGene Expression ProfilingMetalloproteasesMicroscopy, FluorescenceMutationOligonucleotidesPeptide HydrolasesAdhesins, BacterialAminoacyltransferasesBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPCysteine EndopeptidasesMetalloproteasesOligonucleotidesPeptide HydrolasesPeptidoglycanVirulence Factorsbacterial pathogenesiscell surface proteincell wall anchoringClostridium difficilecyclic diGMP (c-diGMP)gene regulationproteinasesortase

Identifiers

PMID26283789
PMCPMC4591827
OpenAlexW2207990462

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.