Evidence map›Paper›PMID 26283626›Full record

ArticleBreast cancer research : BCR2015

Prevalence of PALB2 mutations in Australian familial breast cancer cases and controls.

Ella R Thompson, Kylie L Gorringe, Simone M Rowley, Michelle W Wong-Brown, Simone McInerny, Na Li, Alison H Trainer, Lisa Devereux, Maria A Doyle, Jason Li and 7 more

Abstract read
In one paragraph

Article in Breast cancer research : BCR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Cohort Profile: Lifepool.International journal of epidemiology · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Mutations ofGenes · 2023
    Article
  9. Article
  10. Article
  11. Observational
  12. Article
  13. Article
  14. Article
  15. Article
  16. Non-Journal of global oncology · 2019
    Article
  17. Population-based genetic testing of asymptomatic women for breast and ovarian cancer susceptibility.Genetics in medicine : official journal of the American College of Medical Genetics · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ella R ThompsonCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. ella.thompson@petermac.org.
Kylie L GorringeCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. kylie.gorringe@petermac.org.
Simone M RowleyCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. simone.rowley@petermac.org.
Michelle W Wong-BrownDiscipline of Medical Genetics and Centre for Information-Based Medicine, The University of Newcastle and Hunter Medical Research Institute, 1 Kookaburra Circuit, Newcastle, NSW, 2305, Australia. michelle.wong-brown@newcastle.edu.au.
Simone McInernyFamilial Cancer Centre, Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, VIC, 3002, Australia. simone.mcinerny@petermac.org.
Na LiCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. na.li@petermac.org.
Alison H TrainerCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. Alison.trainer@petermac.org.
Lisa DevereuxCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. lisa.devereux@petermac.org.
Maria A DoyleBioinformatics Core Facility, Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, VIC, 3002, Australia. maria.doyle@petermac.org.
Jason LiBioinformatics Core Facility, Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, VIC, 3002, Australia. Jason.li@petermac.org.
Richard LupatBioinformatics Core Facility, Peter MacCallum Cancer Centre, St Andrews Place, East Melbourne, VIC, 3002, Australia. Richard.lupat@petermac.org.
Martin B DelatyckiAustin Health, 145 Studley Road, Heidelberg, VIC, 3084, Australia. martin.delatycki@ghsv.org.au.
LifePool Investigators
Gillian MitchellThe Sir Peter MacCallum Department of Oncology, St Andrews Place, East Melbourne, VIC, 3002, Australia. Gillian.mitchell@petermac.org.
Paul A JamesThe Sir Peter MacCallum Department of Oncology, St Andrews Place, East Melbourne, VIC, 3002, Australia. paul.james@petermac.org.
Rodney J ScottCancer Biology Research Center, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, 1037 Luoyu Road, Wuhan, Hubei, China. rodney.scott@newcastle.edu.au.
Ian G CampbellCancer Genetics Laboratory, Peter MacCallum Cancer Centre, Locked Bag 1, A'Beckett St, East Melbourne, VIC, 8006, Australia. ian.campbell@petermac.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionPALB2 is emerging as a high-penetrance breast cancer predisposition gene in the order of BRCA1 and BRCA2. However, large studies that have evaluated the full gene rather than just the most common variants in both cases and controls are required before all truncating variants can be included in familial breast cancer variant testing.

methodsIn this study we analyse almost 2000 breast cancer cases sourced from individuals referred to familial cancer clinics, thus representing typical cases presenting in clinical practice. These cases were compared to a similar number of population-based cancer-free controls.

resultsWe identified a significant excess of truncating variants in cases (1.3 %) versus controls (0.2 %), including six novel variants (p = 0.0001; odds ratio (OR) 6.58, 95 % confidence interval (CI) 2.3-18.9). Three of the four control individuals carrying truncating variants had at least one relative with breast cancer. There was no excess of missense variants in cases overall, but the common c.1676A > G variant (rs152451) was significantly enriched in cases and may represent a low-penetrance polymorphism (p = 0.002; OR 1.24 (95 % CI 1.09-1.47).

conclusionsOur findings support truncating variants in PALB2 as high-penetrance breast cancer susceptibility alleles, and suggest that a common missense variant may also lead to a low level of increased breast cancer risk.

Indexed as

AdultAgedAged, 80 and overAllelesAustraliaBreast NeoplasmsCase-Control StudiesFanconi Anemia Complementation Group N ProteinGenetic Predisposition to DiseaseHumansMiddle AgedMutationNuclear ProteinsPrevalenceRiskTumor Suppressor ProteinsFanconi Anemia Complementation Group N ProteinNuclear ProteinsPALB2 protein, humanTumor Suppressor Proteins

Identifiers

PMID26283626
PMCPMC4539664

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.