Evidence map›Paper›PMID 26283363›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Viral fusion protein transmembrane domain adopts β-strand structure to facilitate membrane topological changes for virus-cell fusion.

Hongwei Yao, Michelle W Lee, Alan J Waring, Gerard C L Wong, Mei Hong

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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  9. [SARS-COV2, variants, membranes and basic physics].Bulletin de l'Academie nationale de medecine · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hongwei YaoDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139;
Michelle W LeeDepartment of Bioengineering, California NanoScience Institute, University of California, Los Angeles, CA 90095;ORCID http://orcid.org/0000-0003-1613-9501
Alan J WaringDepartment of Physiology and Biophysics, University of California, Irvine, CA 92697; Department of Medicine, Harbor University of California Los Angeles Medical Center, LA BioMed, Torrance, CA 90502.
Gerard C L WongDepartment of Bioengineering, California NanoScience Institute, University of California, Los Angeles, CA 90095;
Mei HongDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139; meihong@mit.edu.

Funding

OverallP41EB002026 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GRIFFIN, ROBERT GUY · 2003 to 2018
$17.9M
Structures and lipid interactions of curvature-inducing membrane peptides by NMRR01GM066976 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HONG, MEI · 2003 to 2021
$4.8M
NIBIB NIH HHS EB002026NIBIB NIH HHS P41 EB002026NIGMS NIH HHS GM066976NIGMS NIH HHS R01 GM066976
6 · The paper itself

Abstract

The C-terminal transmembrane domain (TMD) of viral fusion proteins such as HIV gp41 and influenza hemagglutinin (HA) is traditionally viewed as a passive α-helical anchor of the protein to the virus envelope during its merger with the cell membrane. The conformation, dynamics, and lipid interaction of these fusion protein TMDs have so far eluded high-resolution structure characterization because of their highly hydrophobic nature. Using magic-angle-spinning solid-state NMR spectroscopy, we show that the TMD of the parainfluenza virus 5 (PIV5) fusion protein adopts lipid-dependent conformations and interactions with the membrane and water. In phosphatidylcholine (PC) and phosphatidylglycerol (PG) membranes, the TMD is predominantly α-helical, but in phosphatidylethanolamine (PE) membranes, the TMD changes significantly to the β-strand conformation. Measured order parameters indicate that the strand segments are immobilized and thus oligomerized. (31)P NMR spectra and small-angle X-ray scattering (SAXS) data show that this β-strand-rich conformation converts the PE membrane to a bicontinuous cubic phase, which is rich in negative Gaussian curvature that is characteristic of hemifusion intermediates and fusion pores. (1)H-(31)P 2D correlation spectra and (2)H spectra show that the PE membrane with or without the TMD is much less hydrated than PC and PG membranes, suggesting that the TMD works with the natural dehydration tendency of PE to facilitate membrane merger. These results suggest a new viral-fusion model in which the TMD actively promotes membrane topological changes during fusion using the β-strand as the fusogenic conformation.

Indexed as

Cell FusionHemagglutinins, ViralHIV Envelope Protein gp41Membrane LipidsNuclear Magnetic Resonance, BiomolecularProtein ConformationScattering, Small AngleViral Fusion ProteinsWaterX-Ray Diffractiongp41 protein, Human immunodeficiency virus 1Hemagglutinins, ViralHIV Envelope Protein gp41Membrane LipidsViral Fusion ProteinsWaterconformational polymorphismmembrane curvaturepeptide–membrane interactionssmall-angle X-ray scatteringsolid-state NMR spectroscopy

Identifiers

PMID26283363
PMCPMC4568205

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.