Evidence map›Paper›PMID 26281829›Full record

ArticleGenome biology2015

Response to Hron et al.

Peter V Lovell, Morgan Wirthlin, Lucia Carbone, Wesley C Warren, Claudio V Mello

Abstract readLetterComment
In one paragraph

Article in Genome biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Avian genomics lends insights into endocrine function in birds.General and comparative endocrinology · 2018
    Review
  5. Review
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Peter V LovellDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.
Morgan WirthlinDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.
Lucia CarboneDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA.
Wesley C WarrenThe Genome Institute, Washington University School of Medicine, St Louis, MO, USA.
Claudio V MelloDepartment of Behavioral Neuroscience, Oregon Health and Science University, Portland, OR, USA. melloc@ohsu.edu.

Funding

A Gene Expression Brain Atlas of the Zebra Finch.R24GM092842 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI MELLO, CLAUDIO V · 2010 to 2013
$1.5M
NIGMS NIH HHS R24 GM092842NIGMS NIH HHS R24-GM092842
6 · The paper itself

Abstract

Hron et al. provide transcriptome evidence that three (1.1 %) of the 274 genes reported by Lovell et al. as missing in birds may actually be 'hidden' as a result of high GC content. Although this factor may explain some gene absences from genomic assemblies, we believe it is insufficient to account for the extensive syntenic losses described in Lovell et al. Please see related article: www.dx.doi.org/10.1186/s13059-015-0724-z.

Indexed as

AnimalsAvian ProteinsBirdsGenomicsHumansAvian Proteins

Identifiers

PMID26281829
PMCPMC4539853

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.