Evidence map›Paper›PMID 26278008›Full record

ArticleScientific reports2015

An improved cucumber mosaic virus-based vector for efficient decoying of plant microRNAs.

Qiansheng Liao, Yifei Tu, John P Carr, Zhiyou Du

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  11. Frontiers in plant science · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Qiansheng LiaoCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China.
Yifei TuCollege of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China.
John P CarrDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
Zhiyou Du1] College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China [2] Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom.
Zhejiang Sci-Tech University · CNUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D014376/1Biotechnology and Biological Sciences Research Council BB/J011762/1
6 · The paper itself

Abstract

We previously devised a cucumber mosaic virus (CMV)-based vector system carrying microRNA target mimic sequences for analysis of microRNA function in Arabidopsis thaliana. We describe an improved version in which target mimic cloning is achieved by annealing two partly-overlapping complementary DNA oligonucleotides for insertion into an infectious clone of CMV RNA3 (LS strain) fused to the cauliflower mosaic virus-derived 35S promoter. LS-CMV variants carrying mimic sequences were generated by co-infiltrating plants with Agrobacterium tumefaciens cells harboring engineered RNA3 with cells carrying RNA1 and RNA2 infectious clones. The utility of using agroinfection to deliver LS-CMV-derived microRNA target mimic sequences was demonstrated using a miR165/166 target mimic and three solanaceous hosts: Nicotiana benthamiana, tobacco (N. tabacum), and tomato (Solanum lycopersicum). In all three hosts the miR165/166 target mimic induced marked changes in developmental phenotype. Inhibition of miRNA accumulation and increased target mRNA (HD-ZIP III) accumulation was demonstrated in tomato. Thus, a CMV-derived target mimic delivered via agroinfection is a simple, cheap and powerful means of launching virus-based miRNA mimics and is likely to be useful for high-throughput investigation of miRNA function in a wide range of plants.

Indexed as

ArabidopsisCaulimovirusCucumovirusGenetic VectorsMicroRNAsNicotianaOligonucleotides, AntisensePhenotypePlant LeavesPromoter Regions, GeneticReal-Time Polymerase Chain ReactionRNA, PlantRNA, RibosomalRNA, ViralSolanum lycopersicumMicroRNAsMIRN165 microRNA, ArabidopsisMIRN166 microRNA, ArabidopsisOligonucleotides, AntisenseRNA, PlantRNA, RibosomalRNA, Viral

Identifiers

PMID26278008
PMCPMC4538387
OpenAlexW872069329

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.