Evidence map›Paper›PMID 26277612›Full record

ArticleMarine biotechnology (New York, N.Y.)2015

Hypoxia-Inducible Factor α and Hif-prolyl Hydroxylase Characterization and Gene Expression in Short-Time Air-Exposed Mytilus galloprovincialis.

Alessia Giannetto, Maria Maisano, Tiziana Cappello, Sabrina Oliva, Vincenzo Parrino, Antonino Natalotto, Giuseppe De Marco, Chiara Barberi, Orazio Romeo, Angela Mauceri and 1 more

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Article in Marine biotechnology (New York, N.Y.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 74 citations in OpenAlex.

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  8. Modulated Expression and Activities ofFrontiers in physiology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Alessia GiannettoDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy. agiannetto@unime.it.
Maria MaisanoDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Tiziana CappelloDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Sabrina OlivaDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Vincenzo ParrinoDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Antonino NatalottoDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Giuseppe De MarcoDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Chiara BarberiDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Orazio RomeoDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Angela MauceriDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
Salvatore FasuloDepartment of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
University of Messina · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aquatic organisms experience environmental hypoxia as a result of eutrophication and naturally occurring tidal cycles. Mytilus galloprovincialis, being an anoxic/hypoxic-tolerant bivalve, provides an excellent model to investigate the molecular mechanisms regulating oxygen sensing. Across the animal kingdom, inadequacy in oxygen supply is signalled predominantly by hypoxia-inducible factors (HIF) and Hif-prolyl hydroxylases (PHD). In this study, hif-α 5'-end and partial phd mRNA sequences from M. galloprovincialis were obtained. Phylogenetic and molecular characterization of both HIF-α and PHD putative proteins showed shared key features with the respective orthologues from animals strongly suggesting their crucial involvement in the highly conserved oxygen sensing pathway. Both transcripts displayed a tissue-specific distribution with prominent expression in gills. Quantitative gene expression analysis of hif-α and phd mRNAs from gills of M. galloprovincialis demonstrated that both these key sensors are transcriptionally modulated by oxygen availability during the short-time air exposure and subsequent re-oxygenation treatments proving that they are critical players of oxygen-sensing mechanisms in mussels. Remarkably, hif-α gene expression showed a prompt and transient response suggesting the precocious implication of this transcription factor in the early phase of the adaptive response to hypoxia in Mytilus. HIF-α and PHD proteins were modulated in a time-dependent manner with trends comparable to mRNA expression patterns, thus suggesting a central role of their transcriptional regulation in the hypoxia tolerance strategies in marine bivalves. These results provide molecular information about the effects of oxygen deficiency and identify hypoxia-responsive biomarker genes in mussels applicable in ecotoxicological studies of natural marine areas.

Indexed as

Amino Acid SequenceAnimalsGene ExpressionHypoxia-Inducible Factor 1Hypoxia-Inducible Factor-Proline DioxygenasesMolecular Sequence DataMytilusPhylogenySequence AlignmentHypoxia-Inducible Factor 1Hypoxia-Inducible Factor-Proline DioxygenasesGene expressionHypoxia-inducible factorMytilus galloprovincialisOxygen sensing

Identifiers

PMID26277612
OpenAlexW1471663045

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.