Evidence map›Paper›PMID 26273661›Full record

ArticleBioMed research international2015

Bacterial Diversity and Bioremediation Potential of the Highly Contaminated Marine Sediments at El-Max District (Egypt, Mediterranean Sea).

Ranya A Amer, Francesca Mapelli, Hamada M El Gendi, Marta Barbato, Doaa A Goda, Anna Corsini, Lucia Cavalca, Marco Fusi, Sara Borin, Daniele Daffonchio and 1 more

Abstract read
In one paragraph

Article in BioMed research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ranya A AmerEnvironmental Biotechnology Department, Genetic Engineering and Biotechnology Research Institute, City of Scientific Research and Technology Applications, Alexandria, Egypt.
Francesca MapelliDepartment of Food, Environment and Nutritional Sciences (DeFENS), University of Milan, 20133 Milan, Italy.
Hamada M El GendiBioprocess Development Department, Genetic Engineering and Biotechnology Research Institute, City of Scientific Research and Technology Applications, Alexandria, Egypt.
Marta BarbatoDepartment of Food, Environment and Nutritional Sciences (DeFENS), University of Milan, 20133 Milan, Italy.
Doaa A GodaBioprocess Development Department, Genetic Engineering and Biotechnology Research Institute, City of Scientific Research and Technology Applications, Alexandria, Egypt.
Anna CorsiniDepartment of Food, Environment and Nutritional Sciences (DeFENS), University of Milan, 20133 Milan, Italy.
Lucia CavalcaDepartment of Food, Environment and Nutritional Sciences (DeFENS), University of Milan, 20133 Milan, Italy.
Marco FusiBiological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia.
Sara BorinDepartment of Food, Environment and Nutritional Sciences (DeFENS), University of Milan, 20133 Milan, Italy.
Daniele DaffonchioDepartment of Food, Environment and Nutritional Sciences (DeFENS), University of Milan, 20133 Milan, Italy ; Biological and Environmental Sciences and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal 23955, Saudi Arabia.
Yasser R Abdel-FattahGenetic Engineering and Biotechnology Research Institute (GEBRI), City for Scientific Research and Technology Applications (SRTA City), New Burg El-Arab City, Universities and Research Institutes District, Alexandria 21934, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coastal environments worldwide are threatened by the effects of pollution, a risk particularly high in semienclosed basins like the Mediterranean Sea that is poorly studied from bioremediation potential perspective especially in the Southern coast. Here, we investigated the physical, chemical, and microbiological features of hydrocarbon and heavy metals contaminated sediments collected at El-Max bay (Egypt). Molecular and statistical approaches assessing the structure of the sediment-dwelling bacterial communities showed correlations between the composition of bacterial assemblages and the associated environmental parameters. Fifty strains were isolated on mineral media supplemented by 1% crude oil and identified as a diverse range of hydrocarbon-degrading bacteria involved in different successional stages of biodegradation. We screened the collection for biotechnological potential studying biosurfactant production, biofilm formation, and the capability to utilize different hydrocarbons. Some strains were able to grow on multiple hydrocarbons as unique carbon source and presented biosurfactant-like activities and/or capacity to form biofilm and owned genes involved in different detoxification/degradation processes. El-Max sediments represent a promising reservoir of novel bacterial strains adapted to high hydrocarbon contamination loads. The potential of the strains for exploitation for in situ intervention to combat pollution in coastal areas is discussed.

Indexed as

Microbial ConsortiaWater MicrobiologyBacteriaBiodegradation, EnvironmentalBiodiversityEgyptGeologic SedimentsMediterranean SeaWater Purification

Identifiers

PMID26273661
PMCPMC4530241

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.