Evidence map›Paper›PMID 26273280›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2015

Characteristics of dr1790 disruptant and its functional analysis in Deinococcus radiodurans.

Jianhui Cheng, Hu Wang, Xin Xu, Liangyan Wang, Bing Tian, Yuejin Hua

Open access · hybridAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Discovery and Characterization of NativeApplied and environmental microbiology · 2019
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jianhui ChengInstitute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou, China, Institute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
Hu WangInstitute of Ageing Research, Hangzhou Normal University, Hangzhou, China, Institute of Ageing Research, Hangzhou Normal University, Hangzhou, China.
Xin XuZhejiang University, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China.
Liangyan WangZhejiang University, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China.
Bing TianZhejiang University, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China.
Yuejin HuaZhejiang University, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China, Institute of Nuclear-Agricultural Sciences, Zhejiang University, Hangzhou, China.
ZheJiang Academy of Agricultural Sciences · CNHangzhou Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deinococcus radiodurans (DR) is an extremophile that is well known for its resistance to radiation, oxidants and desiccation. The gene dr1790 of D. radiodurans was predicted to encode a yellow-related protein. The primary objective of the present study was to characterize the biological function of the DR1790 protein, which is a member of the ancient yellow/major royal jelly (MRJ) protein family, in prokaryotes. Fluorescence labeling demonstrated that the yellow-related protein encoded by dr1790 is a membrane protein. The deletion of the dr1790 gene decreased the cell growth rate and sensitivity to hydrogen peroxide and radiation and increased the membrane permeability of D. radiodurans. Transcript profiling by microarray and RT-PCR analyses of the dr1790 deletion mutant suggested that some genes that are involved in protein secretion and transport were strongly suppressed, while other genes that are involved in protein quality control, such as chaperones and proteases, were induced. In addition, the expression of genes with predicted functions that are involved in antioxidant systems, electron transport, and energy metabolism was significantly altered through the disruption of dr1790. Moreover, the results of proteomic analyses using 2-DE and MS also demonstrated that DR1790 contributed to D. radiodurans survival. Taken together, these results indicate that the DR1790 protein from the ancient yellow protein family plays a pleiotropic role in the survival of prokaryotic cells and contributes to the extraordinary resistance of D. radiodurans against oxidative and radiation stresses.

Indexed as

Genes, BacterialGenetic PleiotropyMutagenesis, InsertionalBacterial ProteinsCell MembraneDeinococcusGene DeletionGene Expression ProfilingGenetic Complementation TestHydrogen PeroxideMembrane ProteinsMicroarray AnalysisMicrobial ViabilityPermeabilityRadiation, IonizingReal-Time Polymerase Chain ReactionBacterial ProteinsHydrogen PeroxideMembrane ProteinscharacteristicsDeinococcus radioduransdr1790 disruptantfunctional analysis

Identifiers

PMID26273280
PMCPMC4507557
OpenAlexW1563391839

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.