Evidence map›Paper›PMID 26272980›Full record

ArticleMolecular & cellular proteomics : MCP2015

Proteomic Profiling of Detergent Resistant Membranes (Lipid Rafts) of Prostasomes.

Louise Dubois, Karl K Göran Ronquist, Bo Ek, Gunnar Ronquist, Anders Larsson

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
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  5. Review
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  15. The interactome of the prostate-specific protein Anoctamin 7.Cancer biomarkers : section A of Disease markers · 2020
    Article
  16. Proteomic Analysis of Lipid Rafts from RBL-2H3 Mast Cells.International journal of molecular sciences · 2019
    Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Louise DuboisFrom the ‡Department of Medical Sciences, Uppsala University, 75185 Uppsala, Sweden;
Karl K Göran RonquistFrom the ‡Department of Medical Sciences, Uppsala University, 75185 Uppsala, Sweden; goran.ronquist@medsci.uu.se.
Bo Ek§Department of Analytical Chemistry, Science for Life Laboratory, Uppsala University, 751 24 Uppsala, Sweden.
Gunnar RonquistFrom the ‡Department of Medical Sciences, Uppsala University, 75185 Uppsala, Sweden;
Anders LarssonFrom the ‡Department of Medical Sciences, Uppsala University, 75185 Uppsala, Sweden;
Uppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prostasomes are exosomes derived from prostate epithelial cells through exocytosis by multivesicular bodies. Prostasomes have a bilayered membrane and readily interact with sperm. The membrane lipid composition is unusual with a high contribution of sphingomyelin at the expense of phosphatidylcholine and saturated and monounsaturated fatty acids are dominant. Lipid rafts are liquid-ordered domains that are more tightly packed than the surrounding nonraft phase of the bilayer. Lipid rafts are proposed to be highly dynamic, submicroscopic assemblies that float freely within the liquid disordered membrane bilayer and some proteins preferentially partition into the ordered raft domains. We asked the question whether lipid rafts do exist in prostasomes and, if so, which proteins might be associated with them. Prostasomes of density range 1.13-1.19g/ml were subjected to density gradient ultracentrifugation in sucrose fabricated by phosphate buffered saline (PBS) containing 1% Triton X-100 with capacity for banding at 1.10 g/ml, i.e. the classical density of lipid rafts. Prepared prostasomal lipid rafts (by gradient ultracentrifugation) were analyzed by mass spectrometry. The clearly visible band on top of 1.10g/ml sucrose in the Triton X-100 containing gradient was subjected to liquid chromatography-tandem MS and more than 370 lipid raft associated proteins were identified. Several of them were involved in intraluminal vesicle formation, e.g. tetraspanins, ESCRTs, and Ras-related proteins. This is the first comprehensive liquid chromatography-tandem MS profiling of proteins in lipid rafts derived from exosomes. Data are available via ProteomeXchange with identifier PXD002163.

Indexed as

Centrifugation, Density GradientChromatography, LiquidDetergentsEndosomal Sorting Complexes Required for TransportExosomesHumansLipidsLiquid Phase MicroextractionMaleMass SpectrometryMembrane MicrodomainsMolecular Sequence AnnotationOctoxynolProstateProteomeras ProteinsDetergentsEndosomal Sorting Complexes Required for TransportLipidsOctoxynolProteomeras ProteinsTetraspanins

Identifiers

PMID26272980
PMCPMC4638043
OpenAlexW1768028775

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.