Evidence map›Paper›PMID 26271202›Full record

ArticleScientific reports2015

TRIzol and Alu qPCR-based quantification of metastatic seeding within the skeleton.

J Preston Campbell, P Mulcrone, S K Masood, M Karolak, A Merkel, K Hebron, A Zijlstra, J Sterling, F Elefteriou

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. DNA Extraction with TRIzol Reagent Using a Silica Column.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Down-regulation of FZD3 receptor suppresses growth and metastasis of human melanoma independently of canonical WNT signaling.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  17. Article
  18. Article
  19. Skeletal Colonization by Breast Cancer Cells Is Stimulated by an Osteoblast and β2AR-Dependent Neo-Angiogenic Switch.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

J Preston Campbell1] Department of Pharmacology, Vanderbilt University, Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
P Mulcrone1] Department of Pharmacology, Vanderbilt University, Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
S K MasoodVanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
M Karolak1] Department of Pharmacology, Vanderbilt University, Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
A Merkel1] Department of Veterans Affairs (VISN 9), Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
K Hebron1] Department of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
A Zijlstra1] Department of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
J Sterling1] Department of Veterans Affairs (VISN 9), Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.
F Elefteriou1] Department of Pharmacology, Vanderbilt University, Nashville, Tennessee, United States of America [2] Vanderbilt Center for Bone Biology, Vanderbilt University, Nashville, Tennessee, United States of America.

Funding

TUMORS EFFECTS ON THE SKELETONP01CA040035 · NCI · VANDERBILT UNIVERSITY · PI HERMAN, BRIAN A. · 1985 to 2010
$11.0M
Role of Sympathetic Activation and RANKL/IL6 in Breast Cancer Bone MetastasisR01CA168717 · NCI · VANDERBILT UNIVERSITY · PI ELEFTERIOU, FLORENT · 2013 to 2017
$1.6M
Tetraspanin-mediated regulation of tumor cell migration and metastasisR01CA143081 · NCI · VANDERBILT UNIVERSITY · PI ZIJLSTRA, ANDRIES · 2010 to 2014
$1.5M
The Role of Mechanotransduction in Progression of Tumor-induced Bone DiseaseR01CA163499 · NCI · VANDERBILT UNIVERSITY · PI GUELCHER, SCOTT A, RHOADES (STERLING), JULIE A · 2012 to 2016
$1.5M
Regulation of prostate cancer progression by ALCAM proteolysisF31CA189764 · NCI · VANDERBILT UNIVERSITY · PI HEBRON, KATIE ELIZABETH · 2014 to 2016
$76k
Targeting the Bone Microenvironment to Reduce Tumor-induced Bone DiseaseI01BX001957 · VA · VETERANS HEALTH ADMINISTRATION · PI RHOADES (STERLING), JULIE A · 2013 to 2025
–
BLRD VA I01 BX001957NCI NIH HHS 1R01CA163499NCI NIH HHS CA040035NCI NIH HHS CA143081-01NCI NIH HHS CA189764-01NCI NIH HHS F31 CA189764NCI NIH HHS P01 CA040035NCI NIH HHS R01 CA143081NCI NIH HHS R01 CA163499NCI NIH HHS R01 CA168717NCI NIH HHS R01CA168717
6 · The paper itself

Abstract

Current methods for detecting disseminated tumor cells in the skeleton are limited by expense and technical complexity. We describe a simple and inexpensive method to quantify, with single cell sensitivity, human metastatic cancer in the mouse skeleton, concurrently with host gene expression, using TRIzol-based DNA/RNA extraction and Alu sequence qPCR amplification. This approach enables precise quantification of tumor cells and corresponding host gene expression during metastatic colonization in xenograft models.

Indexed as

Alu ElementsAnimalsBiomarkers, TumorBone NeoplasmsCell Line, TumorDNA, NeoplasmGene Expression ProfilingGenetic MarkersGuanidinesMiceMice, NudePhenolsReal-Time Polymerase Chain ReactionReproducibility of ResultsRNA, NeoplasmSensitivity and SpecificityBiomarkers, TumorDNA, NeoplasmGenetic MarkersGuanidinesPhenolsRNA, Neoplasmtrizol

Identifiers

PMID26271202
PMCPMC4536516

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.