Evidence map›Paper›PMID 26271101›Full record

ArticleThe EMBO journal2015

The tRNA methyltransferase Dnmt2 is required for accurate polypeptide synthesis during haematopoiesis.

Francesca Tuorto, Friederike Herbst, Nader Alerasool, Sebastian Bender, Oliver Popp, Giuseppina Federico, Sonja Reitter, Reinhard Liebers, Georg Stoecklin, Hermann-Josef Gröne and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 229 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. tRNA mEMBO reports · 2026
    Article
  5. Review
  6. Article
  7. mBiology direct · 2026
    Review
  8. Review
  9. DNMT Enzymes and Their Impact on Cervical Cancer: A State-of-the-Art Review.International journal of molecular sciences · 2025
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Interpreting ribosome dynamics during mRNA translation.The Journal of biological chemistry · 2025
    Review
  15. Differentiation of mtDNA Methylation in Tissues of Ridgetail White Prawn,Animals : an open access journal from MDPI · 2025
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Francesca TuortoDivision of Epigenetics, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany.
Friederike HerbstDepartment of Translational Oncology, National Center for Tumor Diseases (NCT) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Nader AlerasoolDivision of Epigenetics, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany.
Sebastian BenderDivision of Epigenetics, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany.
Oliver PoppMass Spectrometry Core Unit, MDC, Berlin, Germany.
Giuseppina FedericoDepartment of Cellular and Molecular Pathology, German Cancer Research Center, Heidelberg, Germany.
Sonja ReitterHelmholtz Junior Research Group Posttranscriptional Control of Gene Expression, German Cancer Research Center (DKFZ) and Center for Molecular Biology of the University of Heidelberg (ZMBH), DKFZ-ZMBH Alliance, Heidelberg, Germany.
Reinhard LiebersDivision of Epigenetics, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany.
Georg StoecklinHelmholtz Junior Research Group Posttranscriptional Control of Gene Expression, German Cancer Research Center (DKFZ) and Center for Molecular Biology of the University of Heidelberg (ZMBH), DKFZ-ZMBH Alliance, Heidelberg, Germany.
Hermann-Josef GröneDepartment of Cellular and Molecular Pathology, German Cancer Research Center, Heidelberg, Germany.
Gunnar DittmarMass Spectrometry Core Unit, MDC, Berlin, Germany.
Hanno GlimmDepartment of Translational Oncology, National Center for Tumor Diseases (NCT) and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Frank LykoDivision of Epigenetics, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany f.lyko@dkfz.de.
Heidelberg University · DEDKFZ-ZMBH Alliance · DEGerman Cancer Research Center · DEIONICS Mass Spectrometry (Canada) · CANational Center for Tumor Diseases · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Dnmt2 enzyme utilizes the catalytic mechanism of eukaryotic DNA methyltransferases to methylate several tRNAs at cytosine 38. Dnmt2 mutant mice, flies, and plants were reported to be viable and fertile, and the biological function of Dnmt2 has remained elusive. Here, we show that endochondral ossification is delayed in newborn Dnmt2-deficient mice, which is accompanied by a reduction of the haematopoietic stem and progenitor cell population and a cell-autonomous defect in their differentiation. RNA bisulfite sequencing revealed that Dnmt2 methylates C38 of tRNA Asp(GTC), Gly(GCC), and Val(AAC), thus preventing tRNA fragmentation. Proteomic analyses from primary bone marrow cells uncovered systematic differences in protein expression that are due to specific codon mistranslation by tRNAs lacking Dnmt2-dependent methylation. Our observations demonstrate that Dnmt2 plays an important role in haematopoiesis and define a novel function of C38 tRNA methylation in the discrimination of near-cognate codons, thereby ensuring accurate polypeptide synthesis.

Indexed as

AnimalsAnimals, NewbornCell DifferentiationDNA (Cytosine-5-)-MethyltransferasesHematopoiesisHematopoietic Stem CellsMethylationMiceMice, KnockoutOsteogenesisProtein BiosynthesisRNA, TransferDNA (Cytosine-5-)-MethyltransferasesDnmt2 protein, mouseRNA, Transfer(cytosine‐5) tRNA methylationDnmt2haematopoiesisMSCstranslation fidelity

Identifiers

PMID26271101
PMCPMC4570521
OpenAlexW2116445953

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.