Evidence map›Paper›PMID 26271001›Full record

ArticleBiochemistry2015

Diacyltransferase Activity and Chain Length Specificity of Mycobacterium tuberculosis PapA5 in the Synthesis of Alkyl β-Diol Lipids.

Megan H Touchette, Gopal R Bommineni, Richard J Delle Bovi, John E Gadbery, Carrie D Nicora, Anil K Shukla, Jennifer E Kyle, Thomas O Metz, Dwight W Martin, Nicole S Sampson and 3 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Deletion of theFrontiers in microbiology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Megan H Touchette
Gopal R Bommineni
Richard J Delle Bovi
John E Gadbery
Carrie D NicoraBiological Sciences Division, Pacific Northwest National Laboratory , Richland, Washington 99352, United States.
Anil K ShuklaBiological Sciences Division, Pacific Northwest National Laboratory , Richland, Washington 99352, United States.
Jennifer E KyleBiological Sciences Division, Pacific Northwest National Laboratory , Richland, Washington 99352, United States.
Thomas O MetzBiological Sciences Division, Pacific Northwest National Laboratory , Richland, Washington 99352, United States.
Dwight W Martin
Nicole S Sampson
W Todd Miller
Peter J Tonge
Jessica C Seeliger
Pacific Northwest National Laboratory · US

Funding

SUSTRATE SPECIFICITY OF NONRECEPTOR TYROSINE KINASER01CA058530 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI MILLER, W TODD · 1999 to 2018
$3.7M
Mechanism of Slow Onset Enzyme Inhibition and Translation to Time-Dependent Drug ActivityR01GM102864 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI TONGE, PETER J · 2012 to 2021
$2.6M
SBU Chemistry-Biology Interface Training ProgramT32GM092714 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S, TONGE, PETER J · 2010 to 2019
$1.7M
Acquisition of an Applied Biosystems 4000 QTRAP Mass SpectrometerS10RR023680 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI IDEN, CHARLES R · 2007 to 2007
$435k
MALDI-TOF SPECTROM: PROTEIN: INHIBIT FATTY ACID BIOSYNTHESIS IN M TUBERCULOSISS10RR021008 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S. · 2005 to 2005
$270k
SUBSTRATE SPECIFICITY OF NONRECEPTOR TYROSINE KINASESR29CA058530 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI MILLER, W TODD · 1993 to 1997
–
NCI NIH HHS CA58530NCI NIH HHS R01 CA058530NCRR NIH HHS 1 S10 RR023680-1NCRR NIH HHS S10 RR021008NCRR NIH HHS S10 RR023680NIGMS NIH HHS GM102864NIGMS NIH HHS R01 GM102864NIGMS NIH HHS T32 GM092714
6 · The paper itself

Abstract

Although they are classified as Gram-positive bacteria, Corynebacterineae possess an asymmetric outer membrane that imparts structural and thereby physiological similarity to more distantly related Gram-negative bacteria. Like lipopolysaccharide in Gram-negative bacteria, lipids in the outer membrane of Corynebacterineae have been associated with the virulence of pathogenic species such as Mycobacterium tuberculosis (Mtb). For example, Mtb strains that lack long, branched-chain alkyl esters known as dimycocerosates (DIMs) are significantly attenuated in model infections. The resultant interest in the biosynthetic pathway of these unusual virulence factors has led to the elucidation of many of the steps leading to the final esterification of the alkyl β-diol, phthiocerol, with branched-chain fatty acids known as mycocerosates. PapA5 is an acyltransferase implicated in these final reactions. Here, we show that PapA5 is indeed the terminal enzyme in DIM biosynthesis by demonstrating its dual esterification activity and chain-length preference using synthetic alkyl β-diol substrate analogues. By applying these analogues to a series of PapA5 mutants, we also revise a model for the substrate binding within PapA5. Finally, we demonstrate that the Mtb Ser/Thr kinases PknB and PknE modify PapA5 on three overlapping Thr residues and that a fourth Thr is unique to PknE phosphorylation. These results clarify the DIM biosynthetic pathway and indicate post-translational modifications that warrant further elucidation for their roles in the regulation of DIM biosynthesis.

Indexed as

AcyltransferasesEnzyme ActivationFatty AcidsLipidsMycobacterium tuberculosisProtein Structure, SecondaryProtein Structure, TertiaryAcyltransferasesFatty AcidsLipidsPapA5 protein, Mycobacterium tuberculosisphthioceranic acid

Identifiers

PMID26271001
PMCPMC4609546
OpenAlexW1428838771

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.