Evidence map›Paper›PMID 26269716›Full record

ArticleBioData mining2015

Informative gene network for chemotherapy-induced peripheral neuropathy.

Cielito C Reyes-Gibby, Jian Wang, Sai-Ching J Yeung, Sanjay Shete

Open access · goldAbstract read
In one paragraph

Article in BioData mining, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Frontiers in immunology · 2021
    Article
  6. Article
  7. Chemokine Signaling in Chemotherapy-Induced Neuropathic Pain.International journal of molecular sciences · 2019
    Review
  8. Article
  9. Review
  10. Review
  11. Hepatitis C virus and neurological damage.World journal of hepatology · 2016
    Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Cielito C Reyes-Gibby *Department of Emergency Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX 77030 USA.
Jian Wang *Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030 USA.
Sai-Ching J YeungDepartment of Emergency Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX 77030 USA.
Sanjay SheteDepartment of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030 USA.
The University of Texas MD Anderson Cancer Center · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Molecular Epidemiology of Neuropathic Pain in Head and Neck CancerR01DE022891 · NIDCR · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI REYES-GIBBY, CIELITO C, SHETE, SANJAY · 2012 to 2016
$3.0M
Genome Wide Association Study of Head and Neck CancerR01CA131324 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SHETE, SANJAY · 2009 to 2013
$2.8M
Innovative Multidisciplinary Education: The Statistical Genetics of AddictionR25DA026120 · NIDA · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHANG, SHINE, SHETE, SANJAY · 2010 to 2014
$1.5M
Method to analyze X-chromosomal genetic dataR03CA192197 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WANG, JIAN · 2015 to 2016
$160k
NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA131324NCI NIH HHS R03 CA192197NIDA NIH HHS R25 DA026120NIDCR NIH HHS R01 DE022891
6 · The paper itself

Abstract

backgroundHost genetic variability has been implicated in chemotherapy-induced peripheral neuropathy (CIPN). A dose-limiting toxicity for chemotherapy agents, CIPN is also a debilitating condition that may progress to chronic neuropathic pain. We utilized a bioinformatics approach, which captures the complexity of intracellular and intercellular interactions, to identify genes for CIPN.

methodsUsing genes pooled from the literature as a starting point, we used Ingenuity Pathway Analysis (IPA) to generate gene networks for CIPN.

resultsWe performed IPA core analysis for genes associated with platinum-, taxane- and platinum-taxane-induced neuropathy. We found that IL6, TNF, CXCL8, IL1B and ERK1/2 were the top genes in terms of the number of connections in platinum-induced neuropathy and TP53, MYC, PARP1, P38 MAPK and TNF for combined taxane-platinum-induced neuropathy.

conclusionNeurotoxicity is common in cancer patients treated with platinum compounds and anti-microtubule agents and CIPN is one of the debilitating sequela. The bioinformatic approach helped identify genes associated with CIPN in cancer patients.

Identifiers

PMID26269716
PMCPMC4534051
OpenAlexW2167905862

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.