Evidence map›Paper›PMID 26269378›Full record

ArticlePlant biotechnology journal2016

GbEXPATR, a species-specific expansin, enhances cotton fibre elongation through cell wall restructuring.

Yang Li, Lili Tu, Filomena A Pettolino, Shengmei Ji, Juan Hao, Daojun Yuan, Fenglin Deng, Jiafu Tan, Haiyan Hu, Qing Wang and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant biotechnology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
11.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 112 citations in OpenAlex.

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  5. Comparative multi "omics" profiling ofFrontiers in plant science · 2026
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  10. Origin, Evolution, and Diversification of the Expansin Family in Plants.International journal of molecular sciences · 2024
    Article
  11. Article
  12. Simultaneous improvement of fiber yield and quality in upland cotton (Molecular breeding : new strategies in plant improvement · 2024
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  13. Article
  14. Article
  15. Article
  16. Review
  17. Transcriptome Sequencing ofPlants (Basel, Switzerland) · 2023
    Article
  18. Article
  19. Article
  20. Genome-Wide Identification of Expansin Genes in Wild Soybean (International journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Yang LiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Lili TuNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Filomena A PettolinoCommonwealth Scientific and Industrial Research Organization (CSIRO), Plant Industry, Canberra, ACT, Australia.
Shengmei JiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Juan HaoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Daojun YuanNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Fenglin DengNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Jiafu TanNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Haiyan HuNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Qing WangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Danny J LlewellynCommonwealth Scientific and Industrial Research Organization (CSIRO), Plant Industry, Canberra, ACT, Australia.
Xianlong ZhangNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, China.
Huazhong Agricultural University · CNCommonwealth Scientific and Industrial Research Organisation · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cotton provides us the most important natural fibre. High fibre quality is the major goal of cotton breeding, and introducing genes conferring longer, finer and stronger fibre from Gossypium barbadense to Gossypium hirsutum is an important breeding strategy. We previously analysed the G. barbadense fibre development mechanism by gene expression profiling and found two homoeologous fibre-specific α-expansins from G. barbadense, GbEXPA2 and GbEXPATR. GbEXPA2 (from the DT genome) is a classical α-expansin, while its homoeolog, GbEXPATR (AT genome), encodes a truncated protein lacking the normal C-terminal polysaccharide-binding domain of other α-expansins and is specifically expressed in G. barbadense. Silencing EXPA in G. hirsutum induced shorter fibres with thicker cell walls. GbEXPA2 overexpression in G. hirsutum had no effect on mature fibre length, but produced fibres with a slightly thicker wall and increased crystalline cellulose content. Interestingly, GbEXPATR overexpression resulted in longer, finer and stronger fibres coupled with significantly thinner cell walls. The longer and thinner fibre was associated with lower expression of a number of secondary wall-associated genes, especially chitinase-like genes, and walls with lower cellulose levels but higher noncellulosic polysaccharides which advocated that a delay in the transition to secondary wall synthesis might be responsible for better fibre. In conclusion, we propose that α-expansins play a critical role in fibre development by loosening the cell wall; furthermore, a truncated form, GbEXPATR, has a more dramatic effect through reorganizing secondary wall synthesis and metabolism and should be a candidate gene for developing G. hirsutum cultivars with superior fibre quality.

Indexed as

Cotton FiberBase SequenceCell WallCrosses, GeneticDown-RegulationGenes, PlantGenetic Complementation TestPlant ProteinsPlants, Genetically ModifiedPolymorphism, Single NucleotideProtein DomainsSequence Homology, Nucleic AcidSpecies Specificityexpansin protein, plantPlant Proteinscell elongationcotton fibreGossypium barbadense (cotton)secondary cell walltruncated α-expansin

Identifiers

PMID26269378
PMCPMC11388876
OpenAlexW2115288611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.