Evidence map›Paper›PMID 26269172›Full record

ArticleJournal of virology2015

Nef Is Dispensable for Resistance of Simian Immunodeficiency Virus-Infected Macrophages to CD8+ T Cell Killing.

Jennifer N Rainho, Mauricio A Martins, Francesc Cunyat, Ian T Watkins, David I Watkins, Mario Stevenson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Novel role of HIV-1 Nef in regulating the ubiquitination of cellular proteins.Frontiers in cellular and infection microbiology · 2023
    Article
  4. Article
  5. Article
  6. HIV Latency in Myeloid Cells: Challenges for a Cure.Pathogens (Basel, Switzerland) · 2022
    Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. Inhibition of the lncRNA SAF drives activation of apoptotic effector caspases in HIV-1-infected human macrophages.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  12. Impact of Myeloid Reservoirs in HIV Cure Trials.Current HIV/AIDS reports · 2019
    Review
  13. Host and Viral Factors Influencing Interplay between the Macrophage and HIV-1.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2019
    Review
  14. A Quantitative Approach to SIV Functional Latency in Brain Macrophages.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2019
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jennifer N RainhoDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, USA.
Mauricio A MartinsDepartment of Pathology, University of Miami Miller School of Medicine, Miami, Florida, USA.
Francesc CunyatDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, USA.
Ian T WatkinsDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, USA.
David I WatkinsDepartment of Pathology, University of Miami Miller School of Medicine, Miami, Florida, USA.
Mario StevensonDepartment of Medicine, University of Miami Miller School of Medicine, Miami, Florida, USA mstevenson@med.miami.edu.
University of Miami · US

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
University of Miami Developmental Center for AIDS Research (D-CFAR)P30AI073961 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ALLAN E RODRIGUEZ · 2007 to 2026
$33.8M
Viral reservoirs and sanctuaries in HAART - treated patients: role and mechanismsU19AI096109 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2011 to 2015
$29.5M
Yellow Fever Vector Development P01AI094420 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BONALDO, MYRNA C · 2012 to 2016
$11.4M
The Functional Significance of CTL EscapeR37AI052056 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI WATKINS, DAVID I · 2008 to 2017
$7.1M
Vif Antagonism: Lead Discovery and SAR - Project 1P01MH100942 · NIMH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI VON GEGERFELT, AGNETA · 2013 to 2017
$6.0M
Can vaccine-induced CD8 T cells prevent chronic phase AIDS virus replication?R01AI108421 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI WATKINS, DAVID I · 2014 to 2018
$2.9M
The role of myeloid cells in viral replication, persistence and neuroinvasionR01MH093306 · NIMH · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI STEVENSON, MARIO · 2011 to 2015
$1.8M
NIAID NIH HHS 1P01AI094420-03NIAID NIH HHS 1R01AI108421-02NIAID NIH HHS 5R37AI052056-13NIAID NIH HHS P01 AI094420NIAID NIH HHS P30 AI073961NIAID NIH HHS R01 AI108421NIAID NIH HHS R37 AI052056NIAID NIH HHS U19 AI096109NIH HHS P51 OD011106NIMH NIH HHS 1P01MH100942-02NIMH NIH HHS P01 MH100942NIMH NIH HHS R01 MH093306NIMH NIH HHS R01MH093306-01PHS HHS 5U19A1096109-04
6 · The paper itself

Abstract

unlabelledSimian immunodeficiency virus (SIV)-specific CD8(+) T cells kill SIV-infected CD4(+) T cells in an major histocompatibility complex class I (MHC-I)-dependent manner. However, they are reportedly less efficient at killing SIV-infected macrophages. Since the viral accessory protein Nef has been shown to downregulate MHC-I molecules and enhance cytotoxic T lymphocyte (CTL) evasion in human immunodeficiency virus type 1 (HIV-1)-infected CD4(+) T cells, we examined whether Nef played a role in protecting SIV-infected macrophages from killing by SIV-specific CD8(+) T cells. To explore the role of Nef in CD8(+) T cell evasion, we compared the ability of freshly sorted SIV-specific CD8(+) T cells to readily suppress viral replication or eliminate CD4(+) T cells or monocyte-derived macrophages infected with SIV variants containing wild-type (WT) or mutated nef genes. As expected, SIV-specific CD8(+) T cells suppressed viral replication and eliminated the majority of SIV-infected CD4(+) T cells, and this killing was enhanced in CD4(+) T cells infected with the nef variants. However, macrophages infected with nef variants that disrupt MHC-I downregulation did not promote rapid killing by freshly isolated CD8(+) T cells. These results suggest that mechanisms other than Nef-mediated MHC-I downregulation govern the resistance of SIV-infected macrophages to CD8(+) T cell-mediated killing. This study has implications for viral persistence and suggests that macrophages may afford primate lentiviruses some degree of protection from immune surveillance. IMPORTANCE: Myeloid cells are permissive for HIV/SIV replication in vitro and may contribute to viral persistence in vivo. While many studies have been geared to understanding how CD8(+) T cells control viral replication in CD4(+) T cells, the role of these cells in controlling viral replication in macrophages is less clear. Primary, unstimulated CD8(+) T cells insignificantly suppress viral replication or eliminate SIV-infected macrophages. Since the viral Nef protein downregulates MHC-I and provides infected cells some degree of protection from CD8(+) T cell-mediated effector functions, we evaluated whether Nef may be contributing to the resistance of macrophages to CD8(+) T cell suppression. Our results suggest that Nef is not involved in protecting infected macrophages from CD8(+) T cell killing and suggest that other mechanisms are involved in macrophage evasion from CD8 surveillance.

Indexed as

Immune EvasionAnimalsCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCytotoxicity, ImmunologicFemaleGene ExpressionHistocompatibility Antigens Class IImmunophenotypingMacaca mulattaMacrophagesMaleMutationSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusViral Regulatory and Accessory ProteinsHistocompatibility Antigens Class INEF protein, SIVViral Regulatory and Accessory Proteins

Identifiers

PMID26269172
PMCPMC4580207
OpenAlexW2200247046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.