Evidence map›Paper›PMID 26268801›Full record

ArticleMolecular microbiology2015

The mycobacterial iron-dependent regulator IdeR induces ferritin (bfrB) by alleviating Lsr2 repression.

Krishna Kurthkoti, Priyanka Tare, Rakhi Paitchowdhury, Vykuntham Naga Gowthami, Maria J Garcia, Roberto Colangeli, Dipankar Chatterji, Valakunja Nagaraja, G Marcela Rodriguez

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. The role of transcriptional regulators in metal ion homeostasis ofFrontiers in cellular and infection microbiology · 2024
    Review
  7. The progress ofFrontiers in medicine · 2024
    Review
  8. TargetingRSC medicinal chemistry · 2023
    Review
  9. The molecular mechanisms of the bacterial iron sensor IdeR.Biochemical Society transactions · 2023
    Article
  10. Article
  11. Review
  12. The Iron Response ofFrontiers in cellular and infection microbiology · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Role of Bacterioferritin & Ferritin inFrontiers in cellular and infection microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Krishna KurthkotiPublic Health Research Institute at New Jersey Medical School, Rutgers State University of New Jersey, 225 Warren Street, Newark, NJ, 07103, USA.
Priyanka TareDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, 560 012, India.
Rakhi PaitchowdhuryMolecular Biophysics Unit, Indian Institute of Science, Bangalore, 560 012, India.
Vykuntham Naga GowthamiDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, 560 012, India.
Maria J GarciaDepartamento de Medicina Preventiva, Facultad de Medicina, Universidad Autónoma de Madrid, Madrid, Spain.
Roberto ColangeliDivision of Infectious Disease and the Center for Emerging Pathogens, Department of Medicine, New Jersey Medical School, Rutgers State University of New Jersey, 225 Warren Street, Newark, NJ, 07103, USA.
Dipankar ChatterjiMolecular Biophysics Unit, Indian Institute of Science, Bangalore, 560 012, India.
Valakunja NagarajaDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, 560 012, India.
G Marcela RodriguezPublic Health Research Institute at New Jersey Medical School, Rutgers State University of New Jersey, 225 Warren Street, Newark, NJ, 07103, USA.
Indian Institute of Science Bangalore · INRutgers New Jersey Medical SchoolRutgers, The State University of New Jersey · USUniversidad Autónoma de Madrid · ES

Funding

M TUBERCULOSIS SURVIVAL AND GROWTH IN VIVOR01AI044856 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI RODRIGUEZ, GLORIA MARCELA, SMITH, ISSAR · 1999 to 2014
$6.8M
Mechanisms and regulation of Mycobacterium tuberculosis iron acquisitionR56AI044856 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI RODRIGUEZ, GLORIA MARCELA, SMITH, ISSAR · 2009 to 2009
$585k
NIAID NIH HHS AI044856NIAID NIH HHS R01 AI044856NIAID NIH HHS R56 AI044856
6 · The paper itself

Abstract

Emerging evidence indicates that precise regulation of iron (Fe) metabolism and maintenance of Fe homeostasis in Mycobacterium tuberculosis (Mtb) are essential for its survival and proliferation in the host. IdeR is a central transcriptional regulator of Mtb genes involved in Fe metabolism. While it is well understood how IdeR functions as a repressor, how it induces transcription of a subset of its targets is still unclear. We investigated the molecular mechanism of IdeR-mediated positive regulation of bfrB, the gene encoding the major Fe-storage protein of Mtb. We found that bfrB induction by Fe required direct interaction of IdeR with a DNA sequence containing four tandem IdeR-binding boxes located upstream of the bfrB promoter. Results of in vivo and in vitro transcription assays identified a direct repressor of bfrB, the histone-like protein Lsr2. IdeR counteracted Lsr2-mediated repression in vitro, suggesting that IdeR induces bfrB transcription by antagonizing the repressor activity of Lsr2. Together, these results elucidate the main mechanism of bfrB positive regulation by IdeR and identify Lsr2 as a new factor contributing to Fe homeostasis in mycobacteria.

Indexed as

Bacterial ProteinsBinding SitesDNA-Binding ProteinsFerritinsGene Expression Regulation, BacterialHistonesHomeostasisIronMycobacterium tuberculosisPromoter Regions, GeneticProtein BindingRepressor ProteinsTranscription, GeneticBacterial ProteinsDNA-Binding ProteinsFerritinsHistonesIdeR protein, Mycobacterium tuberculosisIronLsr2 protein, Mycobacterium tuberculosisRepressor Proteins

Identifiers

PMID26268801
PMCPMC4879814
OpenAlexW1940121534

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.