Evidence map›Paper›PMID 26268558›Full record

ArticleThe Biochemical journal2015

The solution structures of native and patient monomeric human IgA1 reveal asymmetric extended structures: implications for function and IgAN disease.

Gar Kay Hui, David W Wright, Owen L Vennard, Lucy E Rayner, Melisa Pang, See Cheng Yeo, Jayesh Gor, Karen Molyneux, Jonathan Barratt, Stephen J Perkins

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. 3D Structures of IgA, IgM, and Components.International journal of molecular sciences · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. IgA: Structure, Function, and Developability.Antibodies (Basel, Switzerland) · 2019
    Review
  14. Article
  15. Distinct Fcα receptorThe Journal of biological chemistry · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Gar Kay HuiDepartment of Structural and Molecular Biology, Darwin Building, University College London, Gower Street, London WC1E 6BT, U.K.
David W WrightDepartment of Structural and Molecular Biology, Darwin Building, University College London, Gower Street, London WC1E 6BT, U.K.
Owen L VennardDepartment of Infection, Immunity and Inflammation, Maurice Shock Medical Sciences Building, University of Leicester, University Road, Leicester LE1 9HN, U.K.
Lucy E RaynerDepartment of Structural and Molecular Biology, Darwin Building, University College London, Gower Street, London WC1E 6BT, U.K.
Melisa PangDepartment of Structural and Molecular Biology, Darwin Building, University College London, Gower Street, London WC1E 6BT, U.K.
See Cheng YeoDepartment of Infection, Immunity and Inflammation, Maurice Shock Medical Sciences Building, University of Leicester, University Road, Leicester LE1 9HN, U.K.
Jayesh GorDepartment of Structural and Molecular Biology, Darwin Building, University College London, Gower Street, London WC1E 6BT, U.K.
Karen MolyneuxDepartment of Infection, Immunity and Inflammation, Maurice Shock Medical Sciences Building, University of Leicester, University Road, Leicester LE1 9HN, U.K.
Jonathan BarrattDepartment of Infection, Immunity and Inflammation, Maurice Shock Medical Sciences Building, University of Leicester, University Road, Leicester LE1 9HN, U.K.
Stephen J PerkinsDepartment of Structural and Molecular Biology, Darwin Building, University College London, Gower Street, London WC1E 6BT, U.K. s.perkins@ucl.ac.uk.
Institute of Structural and Molecular Biology · GBUniversity of Leicester · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Native IgA1, for which no crystal structure is known, contains an O-galactosylated 23-residue hinge region that joins its Fab and Fc regions. IgA nephropathy (IgAN) is a leading cause of chronic kidney disease in developed countries. Because IgA1 in IgAN often has a poorly O-galactosylated hinge region, the solution structures of monomeric IgA1 from a healthy subject and three IgAN patients with four different O-galactosylation levels were studied. Analytical ultracentrifugation showed that all four IgA1 samples were monomeric with similar sedimentation coefficients, s(0)20,w. X-ray scattering showed that the radius of gyration (Rg) slightly increased with IgA1 concentration, indicating self-association, although their distance distribution curves, P(r), were unchanged with concentration. Neutron scattering indicated similar Rg values and P(r) curves, although IgA1 showed a propensity to aggregate in heavy water buffer. A new atomistic modelling procedure based on comparisons with 177000 conformationally-randomized IgA1 structures with the individual experimental scattering curves revealed similar extended Y-shaped solution structures for all four differentially-glycosylated IgA1 molecules. The final models indicated that the N-glycans at Asn(263) were folded back against the Fc surface, the C-terminal tailpiece conformations were undefined and hinge O-galactosylation had little effect on the solution structure. The solution structures for full-length IgA1 showed extended hinges and the Fab and Fc regions were positioned asymmetrically to provide ample space for the functionally-important binding of two FcαR receptors to its Fc region. Whereas no link between O-galactosylation and the IgA1 solution structure was detected, an increase in IgA1 aggregation with reduced O-galactosylation may relate to IgAN.

Indexed as

Glomerulonephritis, IGAModels, MolecularProtein Aggregation, PathologicalCrystallography, X-RayFemaleHumansImmunoglobulin AImmunoglobulin Fab FragmentsImmunoglobulin Fc FragmentsMaleProtein Structure, QuaternaryImmunoglobulin AImmunoglobulin Fab FragmentsImmunoglobulin Fc Fragmentsanalytical ultracentrifugationantibodyconstrained modellinghuman immunoglobulin A1 (IgA1)immunoglobulin A (IgA) nephropathyneutron scatteringX-ray scattering

Identifiers

PMID26268558
PMCPMC4692083
OpenAlexW2179577292

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.