Evidence map›Paper›PMID 26267367›Full record

ArticleScientific reports2015

Flexibility and extracellular opening determine the interaction between ligands and insect sulfakinin receptors.

Na Yu, Moises João Zotti, Freja Scheys, Antônio S K Braz, Pedro H C Penna, Ronald J Nachman, Guy Smagghe

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Identification of sulfakinin receptors (SKR) in Tenebrio molitor beetle and the influence of sulfakinins on carbohydrates metabolism.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2020
    Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Na YuDepartment of Crop Protection, Faculty of Bioscience Engineering, Ghent University, 9000 Ghent, Belgium.
Moises João ZottiMolecular Entomology and Applied Bioinformatics, Department of Crop Protection, Federal University of Pelotas, 96010-900, Pelotas, RS, Brazil.
Freja ScheysDepartment of Crop Protection, Faculty of Bioscience Engineering, Ghent University, 9000 Ghent, Belgium.
Antônio S K BrazLaboratory of Computational Biology and Bioinformatics, Federal University of ABC, 09210-170 Santo André, Brazil.
Pedro H C PennaLaboratory of Computational Biology and Bioinformatics, Federal University of ABC, 09210-170 Santo André, Brazil.
Ronald J NachmanInsect Control and Cotton Disease Research Unit, Southern Plains Agricultural Research Center, USDA, College Station, TX 77845, USA.
Guy SmaggheDepartment of Crop Protection, Faculty of Bioscience Engineering, Ghent University, 9000 Ghent, Belgium.
Ghent University · BEUniversidade Federal do ABC · BRSouthern Plains Agricultural Research Center · USUniversidade Federal de Pelotas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite their fundamental importance for growth, the mechanisms that regulate food intake are poorly understood. Our previous work demonstrated that insect sulfakinin (SK) signaling is involved in inhibiting feeding in an important model and pest insect, the red flour beetle Tribolium castaneum. Because the interaction of SK peptide and SK receptors (SKR) initiates the SK signaling, we have special interest on the structural factors that influence the SK-SKR interaction. First, the three-dimensional structures of the two T. castaneum SKRs (TcSKR1 and TcSKR2) were generated from molecular modeling and they displayed significance in terms of the outer opening of the cavity and protein flexibility. TcSKR1 contained a larger outer opening of the cavity than that in TcSKR2, which allows ligands a deep access into the cavity through cell membrane. Second, normal mode analysis revealed that TcSKR1 was more flexible than TcSKR2 during receptor-ligand interaction. Third, the sulfated SK (sSK) and sSK-related peptides were more potent than the nonsulfated SK, suggesting the importance of the sulfate moiety.

Indexed as

Models, MolecularProtein ConformationAmino Acid SequenceAnimalsInsect ProteinsLigandsNeuropeptidesPeptidesReceptors, G-Protein-CoupledSignal TransductionTriboliumInsect ProteinsLigandsNeuropeptidesPeptidesReceptors, G-Protein-Coupled

Identifiers

PMID26267367
PMCPMC4542541
OpenAlexW2294658901

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.