Evidence map›Paper›PMID 26266984›Full record

ArticleNature2015

Structure and mechanism of an active lipid-linked oligosaccharide flippase.

Camilo Perez, Sabina Gerber, Jérémy Boilevin, Monika Bucher, Tamis Darbre, Markus Aebi, Jean-Louis Reymond, Kaspar P Locher

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
14.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 203 citations in OpenAlex.

  1. Article
  2. Mass Photometry Analysis of Membrane Proteins in Detergent Micelles.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Lipid scrambling is a general feature of protein insertases.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Lipid scrambling is a general feature of protein insertases.bioRxiv : the preprint server for biology · 2023
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Relevance of Sugar Transport across the Cell Membrane.International journal of molecular sciences · 2023
    Review
  19. Article
  20. Review

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Camilo PerezInstitute of Molecular Biology and Biophysics, ETH Zürich, CH-8093 Zürich, Switzerland.
Sabina GerberInstitute of Molecular Biology and Biophysics, ETH Zürich, CH-8093 Zürich, Switzerland.
Jérémy BoilevinDepartment of Chemistry and Biochemistry, University of Berne, CH-3012 Berne, Switzerland.
Monika BucherInstitute of Molecular Biology and Biophysics, ETH Zürich, CH-8093 Zürich, Switzerland.
Tamis DarbreDepartment of Chemistry and Biochemistry, University of Berne, CH-3012 Berne, Switzerland.
Markus AebiInstitute of Microbiology, ETH Zürich, CH-8093 Zürich, Switzerland.
Jean-Louis ReymondDepartment of Chemistry and Biochemistry, University of Berne, CH-3012 Berne, Switzerland.
Kaspar P LocherInstitute of Molecular Biology and Biophysics, ETH Zürich, CH-8093 Zürich, Switzerland.
ETH Zurich · CHUniversity of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The flipping of membrane-embedded lipids containing large, polar head groups is slow and energetically unfavourable, and is therefore catalysed by flippases, the mechanisms of which are unknown. A prominent example of a flipping reaction is the translocation of lipid-linked oligosaccharides that serve as donors in N-linked protein glycosylation. In Campylobacter jejuni, this process is catalysed by the ABC transporter PglK. Here we present a mechanism of PglK-catalysed lipid-linked oligosaccharide flipping based on crystal structures in distinct states, a newly devised in vitro flipping assay, and in vivo studies. PglK can adopt inward- and outward-facing conformations in vitro, but only outward-facing states are required for flipping. While the pyrophosphate-oligosaccharide head group of lipid-linked oligosaccharides enters the translocation cavity and interacts with positively charged side chains, the lipidic polyprenyl tail binds and activates the transporter but remains exposed to the lipid bilayer during the reaction. The proposed mechanism is distinct from the classical alternating-access model applied to other transporters.

Indexed as

BiocatalysisAdenosine TriphosphatasesAdenosine TriphosphateATP-Binding Cassette TransportersCampylobacter jejuniCrystallography, X-RayHydrolysisLipid BilayersLipopolysaccharidesModels, MolecularProtein ConformationStructure-Activity RelationshipAdenosine TriphosphatasesAdenosine TriphosphateATP-Binding Cassette TransportersLipid Bilayerslipid-linked oligosaccharidesLipopolysaccharides

Identifiers

PMID26266984
OpenAlexW1189912934

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.