Evidence map›Paper›PMID 26265564›Full record

ReviewPhotochemistry and photobiology2015

Photochemistry and Photobiology of the Spore Photoproduct: A 50-Year Journey.

Peter Setlow, Lei Li

Open access · bronzeAbstract readReview
In one paragraph

Review in Photochemistry and photobiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Frontiers in microbiology · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Peter SetlowDepartment of Molecular Biology and Biophysics, UConn Health, Farmington, CT.
Lei LiDepartment of Chemistry and Chemical Biology, Indiana University-Purdue University Indianapolis (IUPUI), Indianapolis, IN.
Indiana University School of MedicineUConn Health · US

Funding

DEGRADATION REACTIONS IN SPORE GERMINATIONR01GM019698 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI SETLOW, PETER · 1985 to 2007
$1.9M
DEGRADATION REACTIONS IN SPORE GERMINATIONR37GM019698 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI SETLOW, PETER · 1994 to 2003
$1.7M
Enzyme Catalysis of Toluene Degradation and Unusual DNA Photoproduct RepairR00ES017177 · NIEHS · INDIANA UNIVERSITY INDIANAPOLIS · PI LI, LEI · 2009 to 2011
$747k
Enzyme Catalysis of Toluene Degradation and Unusual DNA Photoproduct RepairK99ES017177 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LI, LEI · 2008 to 2009
$167k
NIEHS NIH HHS ES017177NIEHS NIH HHS K99 ES017177NIEHS NIH HHS R00 ES017177NIGMS NIH HHS R01 GM019698NIGMS NIH HHS R37 GM019698
6 · The paper itself

Abstract

Fifty years ago, a new thymine dimer was discovered as the dominant DNA photolesion in UV-irradiated bacterial spores [Donnellan, J. E. & Setlow R. B. (1965) Science, 149, 308-310], which was later named the spore photoproduct (SP). Formation of SP is due to the unique environment in the spore core that features low hydration levels favoring an A-DNA conformation, high levels of calcium dipicolinate that acts as a photosensitizer, and DNA saturation with small, acid-soluble proteins that alters DNA structure and reduces side reactions. In vitro studies reveal that any of these factors alone can promote SP formation; however, SP formation is usually accompanied by the production of other DNA photolesions. Therefore, the nearly exclusive SP formation in spores is due to the combined effects of these three factors. Spore photoproduct photoreaction is proved to occur via a unique H-atom transfer mechanism between the two involved thymine residues. Successful incorporation of SP into an oligonucleotide has been achieved via organic synthesis, which enables structural studies that reveal minor conformational changes in the SP-containing DNA. Here, we review the progress on SP photochemistry and photobiology in the past 50 years, which indicates a very rich SP photobiology that may exist beyond endospores.

Indexed as

PhotobiologyPhotochemistryDNA RepairMolecular StructureSpores, BacterialThymineUltraviolet RaysThymine

Identifiers

PMID26265564
PMCPMC4631623
OpenAlexW1956257391

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.