Evidence map›Paper›PMID 26265453›Full record

ArticleBMC veterinary research2015

Inhibition of porcine reproductive and respiratory syndrome virus replication in vitro using DNA-based short antisense oligonucleotides.

Longlong Zheng, Xiang Li, Lingyun Zhu, Wengui Li, Junlong Bi, Guishu Yang, Gefen Yin, Jianping Liu

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Longlong ZhengDepartment of Veterinary Medicine, College of Animal Science and Technology, Yunnan Agricultural University, Kunming, China. 18314575103@163.com.
Xiang LiPresent address: Wulan Institute for Animal Health, Lingyuan, Chaoyang City, Liaoning province, China. wlbjds22@126.com.
Lingyun ZhuDepartment of Veterinary Medicine, College of Animal Science and Technology, Yunnan Agricultural University, Kunming, China. Zhulingyun_ZYS@163.com.
Wengui LiDepartment of Veterinary Medicine, College of Animal Science and Technology, Yunnan Agricultural University, Kunming, China. wenguili@yeah.net.
Junlong BiPresent address: Center for Animal Disease Control and Prevention of Chuxiong City, Chuxiong City, Yunnan province, China. junlongbi@aliyun.com.
Guishu YangDepartment of Veterinary Medicine, College of Animal Science and Technology, Yunnan Agricultural University, Kunming, China. 2442739714@qq.com.
Gefen YinDepartment of Veterinary Medicine, College of Animal Science and Technology, Yunnan Agricultural University, Kunming, China. yingefen@ynau.edu.cn.
Jianping LiuPresent address: Karolinska Institute, Department of Biosciences and Nutrition, Novum, Huddinge, Sweden. Jianping.liu@ki.se.
Yunnan Agricultural University · CNKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPorcine reproductive and respiratory syndrome (PRRS) is caused by porcine reproductive and respiratory syndrome virus (PRRSV) and is an economically important disease in swine-producing areas. The objective of this study was to screen for effective antisense oligonucleotides (AS-ONs) which could inhibit PRRSV replication in MARC-145 cells and in pulmonary alveolar macrophages (PAM).

resultsNine short AS-ON sequences against the well-conserved regions of PRRSV (5'-UTR, NSP9, ORF5 and ORF7) were selected. When MARC-145 cells or PAM were infected with PRRSV followed by transfection with AS-ONs, four AS-ON sequences targeting 5'-UTR, ORF5 or NSP9 were found to be the most effective oligonucleotides in decreasing the cytopathic effect (CPE) induced by PRRSV infection. Quantitative PCR and indirect immunofluorescence staining confirmed that ORF7 levels were significantly reduced both at RNA and protein levels. The PRRSV titration data furthermore indicated that transfection with AS-ON YN8 could reduce the PRRSV titer by 1000-fold compared with controls.

conclusionThe results presented here indicate that DNA-based antisense oligonucleotides can effectively inhibit PRRSV replication in MARC-145 cells and in PAM. Furthermore, comparing with the reported hit rates (approximately 10-30 %), we achieved a higher success rate (44 %). The strategy we took to design the antisense sequences might be applied to select AS-ONs that more efficiently reduce the expression of target genes.

Indexed as

AnimalsAntiviral AgentsCell LineGene SilencingHaplorhiniMacrophagesOligoribonucleotides, AntisensePorcine respiratory and reproductive syndrome virusPulmonary AlveoliRNA, ViralSwineVirus ReplicationAntiviral AgentsOligoribonucleotides, AntisenseRNA, Viral

Identifiers

PMID26265453
PMCPMC4534064
OpenAlexW1936211672

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.