Evidence map›Paper›PMID 26265282›Full record

ArticleThe Journal of pediatrics2015

Effects of Advancing Gestation and Non-Caucasian Race on Ductus Arteriosus Gene Expression.

Nahid Waleh, Anne Marie Barrette, John M Dagle, Allison Momany, Chengshi Jin, Nancy K Hills, Elaine L Shelton, Jeff Reese, Ronald I Clyman

Open access · greenAbstract read
In one paragraph

Article in The Journal of pediatrics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

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  12. Identification of differentially regulated genes in human patent ductus arteriosus.Experimental biology and medicine (Maywood, N.J.) · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Nahid WalehBiosciences Division, SRI International, Menlo Park, CA.
Anne Marie BarretteCardiovascular Research Institute and Department of Pediatrics, University of California San Francisco, San Francisco, CA.
John M DagleDepartment of Pediatrics, University of Iowa, Iowa City, IA.
Allison MomanyDepartment of Pediatrics, University of Iowa, Iowa City, IA.
Chengshi JinDepartment of Neurology, University of California San Francisco, San Francisco, CA.
Nancy K HillsDepartment of Neurology, University of California San Francisco, San Francisco, CA.
Elaine L SheltonDepartment of Pediatrics, Vanderbilt University, Nashville, TN.
Jeff ReeseDepartment of Pediatrics, Vanderbilt University, Nashville, TN.
Ronald I ClymanCardiovascular Research Institute and Department of Pediatrics, University of California San Francisco, San Francisco, CA. Electronic address: clymanr@peds.ucsf.edu.
University of California, San Francisco · USUniversity of Iowa · USVanderbilt University · USSRI International · US

Funding

Genes contributing to patent ductus arteriosus susceptibility in preterm newbornsR01HL109199 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CLYMAN, RONALD I · 2011 to 2014
$3.0M
Mechanisms of Health and Disease at the Behavioral-Biomedical InterfaceT32GM108540 · NIGMS · UNIVERSITY OF IOWA · PI LUTGENDORF, SUSAN K, VOSS, MICHELLE WEBB · 2014 to 2023
$1.7M
NHLBI NIH HHS HL109199NHLBI NIH HHS R01 HL109199NIGMS NIH HHS T32 GM108540
6 · The paper itself

Abstract

objectiveTo identify genes affected by advancing gestation and racial/ethnic origin in human ductus arteriosus (DA). STUDY

designWe collected 3 sets of DA tissue (n = 93, n = 89, n = 91; total = 273 fetuses) from second trimester pregnancies. We examined four genes, with DNA polymorphisms that distribute along racial lines, to identify "Caucasian" and "non-Caucasian" DA. We used real time polymerase chain reaction to measure RNA expression of 48 candidate genes involved in functional closure of the DA, and used multivariable regression analyses to examine the relationships between advancing gestation, "non-Caucasian" race, and gene expression.

resultsMature gestation and non-Caucasian race are significant predictors for identifying infants who will close their patent DA when treated with indomethacin. Advancing gestation consistently altered gene expression in pathways involved with oxygen-induced constriction (eg, calcium-channels, potassium-channels, and endothelin signaling), contractile protein maturation, tissue remodeling, and prostaglandin and nitric oxide signaling in all 3 tissue sets. None of the pathways involved with oxygen-induced constriction appeared to be altered in "non-Caucasian" DA. Two genes, SLCO2A1 and NOS3, (involved with prostaglandin reuptake/metabolism and nitric oxide production, respectively) were consistently decreased in "non-Caucasian" DA.

conclusionsProstaglandins and nitric oxide are the most important vasodilators opposing DA closure. Indomethacin inhibits prostaglandin production, but not nitric oxide production. Because decreased SLCO2A1 and NOS3 expression can lead to increased prostaglandin and decreased nitric oxide concentrations, we speculate that prostaglandin-mediated vasodilation may play a more dominant role in maintaining the "non-Caucasian" patent DA, making it more likely to close when inhibited by indomethacin.

Indexed as

Gene Expression Regulation, DevelopmentalGestational AgeAortaDNADuctus ArteriosusDuctus Arteriosus, PatentFemaleGenotypeHumansIndomethacinNitric Oxide Synthase Type IIIOrganic Anion TransportersOxygenPolymerase Chain ReactionPolymorphism, GeneticPregnancyDNAIndomethacinNitric Oxide Synthase Type IIINOS3 protein, humanOrganic Anion TransportersOxygenSLCO2A1 protein, human

Identifiers

PMID26265282
PMCPMC4661123
OpenAlexW1822621450

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.