Evidence map›Paper›PMID 26264857›Full record

ArticleScientific reports2015

Design of substrate-based BCR-ABL kinase inhibitors using the cyclotide scaffold.

Yen-Hua Huang, Sónia T Henriques, Conan K Wang, Louise Thorstholm, Norelle L Daly, Quentin Kaas, David J Craik

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. On chip microfluidic separation of cyclotides.Turkish journal of chemistry · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. General lack of structural characterization of chemically synthesized long peptides.Protein science : a publication of the Protein Society · 2019
    Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Cyclotides: Overview and Biotechnological Applications.Chembiochem : a European journal of chemical biology · 2017
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yen-Hua HuangInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
Sónia T HenriquesInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
Conan K WangInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
Louise ThorstholmInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
Norelle L DalyInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
Quentin KaasInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
David J CraikInstitute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.
University of Queensland · AUJames Cook University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The constitutively active tyrosine kinase BCR-ABL is the underlying cause of chronic myeloid leukemia (CML). Current CML treatments rely on the long-term use of tyrosine kinase inhibitors (TKIs), which target the ATP binding site of BCR-ABL. Over the course of treatment, 20-30% of CML patients develop TKI resistance, which is commonly attributed to point mutations in the drug-binding region. We design a new class of peptide inhibitors that target the substrate-binding site of BCR-ABL by grafting sequences derived from abltide, the optimal substrate of Abl kinase, onto a cell-penetrating cyclotide MCoTI-II. Three grafted cyclotides show significant Abl kinase inhibition in vitro in the low micromolar range using a novel kinase inhibition assay. Our work also demonstrates that a reengineered MCoTI-II with abltide sequences grafted in both loop 1 and 6 inhibits the activity of [T315I]Abl in vitro, a mutant Abl kinase harboring the "gatekeeper" mutation which is notorious for being multidrug resistant. Results from serum stability and cell internalization studies confirm that the MCoTI-II scaffold provides enzymatic stability and cell-penetrating properties to the lead molecules. Taken together, our study highlights that reengineered cyclotides incorporating abltide-derived sequences are promising substrate-competitive inhibitors for Abl kinase and the T315I mutant.

Indexed as

Amino Acid SequenceFusion Proteins, bcr-ablHumansK562 CellsMolecular Sequence DataProtein Kinase InhibitorsSequence Homology, Amino AcidSubstrate SpecificityFusion Proteins, bcr-ablProtein Kinase Inhibitors

Identifiers

PMID26264857
PMCPMC4532999
OpenAlexW1956322610

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.