Evidence map›Paper›PMID 26264370›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2016

Identification of genes expressed in the migrating primitive myeloid lineage of Xenopus laevis.

Zachary N Agricola, Amrita K Jagpal, Andrew W Allbee, Allison R Prewitt, Emily T Shifley, Scott A Rankin, Aaron M Zorn, Alan P Kenny

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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  3. Mechanical Tensions Regulate Gene Expression in theInternational journal of molecular sciences · 2024
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  4. Frontiers in physiology · 2020
    Review
  5. Article
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  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Zachary N AgricolaPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Amrita K JagpalPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Andrew W AllbeePerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Allison R PrewittPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Emily T ShifleyPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Scott A RankinPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Aaron M ZornPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
Alan P KennyPerinatal Institute, Cincinnati Children's Hospital Research Foundation and Department of Pediatrics College of Medicine, University of Cincinnati, Cincinnati, Ohio.
University of Cincinnati · USCincinnati Children's Hospital Medical Center · USUniversity of Cincinnati Medical Center · US

Funding

Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Theresa Alenghat · 2007 to 2026
$24.4M
Deciphering the gene regulatory network controlling vertebrate endodermal fatesR01HD073179 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI CHO, KEN W.Y., MJOLSNESS, ERIC D · 2013 to 2017
$2.9M
Molecular Basis of Liver Development.R01DK070858 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI ZORN, AARON M · 2007 to 2017
$2.9M
TRAINING IN DEVELOPMENTAL AND PERINATAL ENDOCRINOLOGYT32HD007463 · NICHD · CINCINNATI CHILDRENS HOSP MED CTR · PI HANDWERGER, STUART · 1994 to 2010
$1.5M
Secreted BMP Antagonists in Foregut Organ DevelopmentK08HL105661 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI KENNY, ALAN PATRICK · 2011 to 2013
$393k
NHLBI NIH HHS K08 HL105661NICHD NIH HHS R01 HD073179NICHD NIH HHS R01 HD73179NICHD NIH HHS T32 HD007463NICHD NIH HHS T32 HD07463NIDDK NIH HHS P30 DK078392NIDDK NIH HHS R01 DK070858
6 · The paper itself

Abstract

backgroundDuring primitive hematopoiesis in Xenopus, cebpa and spib expressing myeloid cells emerge from the anterior ventral blood island. Primitive myeloid cells migrate throughout the embryo and are critical for immunity, healing, and development. Although definitive hematopoiesis has been studied extensively, molecular mechanisms leading to the migration of primitive myelocytes remain poorly understood. We hypothesized these cells have specific extracellular matrix modifying and cell motility gene expression.

resultsIn situ hybridization screens of transcripts expressed in Xenopus foregut mesendoderm at stage 23 identified seven genes with restricted expression in primitive myeloid cells: destrin; coronin actin binding protein, 1a; formin-like 1; ADAM metallopeptidase domain 28; cathepsin S; tissue inhibitor of metalloproteinase-1; and protein tyrosine phosphatase nonreceptor 6. A detailed in situ hybridization analysis revealed these genes are initially expressed in the aVBI but become dispersed throughout the embryo as the primitive myeloid cells become migratory, similar to known myeloid markers. Morpholino-mediated loss-of-function and mRNA-mediated gain-of-function studies revealed the identified genes are downstream of Spib.a and Cebpa, key transcriptional regulators of the myeloid lineage.

conclusionsWe have identified genes specifically expressed in migratory primitive myeloid progenitors, providing tools to study how different gene networks operate in these primitive myelocytes during development and immunity.

Indexed as

AnimalsCell LineageCell MovementDestrinGene Expression RegulationGene Regulatory NetworksMicrofilament ProteinsMyeloid CellsTissue Inhibitor of Metalloproteinase-1Xenopus laevisDestrinMicrofilament ProteinsTissue Inhibitor of Metalloproteinase-1actin; destrin (dstn); coronin, actin binding protein 1a (coro1a)ADAM metallopeptidase domain 28 (adam28)cathepsin S (ctss)CCAAT/enhancer binding protein a(cebpa)formin-like 1 (fmnl1)migrating; spibmyeloidprotein tyrosine phosphatase non-receptor 6 (ptpn6)tissue inhibitor of metalloproteinase-1 (timp-1)Xenopus

Identifiers

PMID26264370
PMCPMC5387764
OpenAlexW1958165606

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.