Evidence map›Paper›PMID 26262113›Full record

ArticleStudies in health technology and informatics2015

Normalization of Phenotypic Data from a Clinical Data Warehouse: Case Study of Heterogeneous Blood Type Data with Surprising Results.

James J Cimino

Abstract read
In one paragraph

Article in Studies in health technology and informatics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

James J CiminoLaboratory for Informatics Development, the Clinical Center of the US National Institutes of Health, Bethesda, Maryland, USA.

Funding

Infobuttons to Improve Information Access in Order EntryR01LM007593 · NLM · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CIMINO, JAMES J. · 2002 to 2007
$2.4M
Biomedical Translational Research Information System (BTRIS) Data Reuse ProtocolZIACL000904 · CLC · CLINICAL CENTER · PI CIMINO, JAMES · 2009 to 2014
$0k
Biomedical Translational Research Information System (BTRIS) Data Reuse ProtocolZIHCL000904 · CLC · CLINICAL CENTER · PI MCKEEBY, JON · 2015 to 2021
$0k
Intramural NIH HHS Z01 CL000904Intramural NIH HHS ZIA CL000904NLM NIH HHS R01 LM007593
6 · The paper itself

Abstract

Clinical data warehouses often contain analogous data from disparate sources, resulting in heterogeneous formats and semantics. We have developed an approach that attempts to represent such phenotypic data in its most atomic form to facilitate aggregation. We illustrate this approach with human blood antigen typing (ABO-Rh) data drawn from the National Institutes of Health's Biomedical Translational Research Information System (BTRIS). In applying the method to actual patient data, we discovered a 2% incidence of changed blood types. We believe our approach can be applied to any institution's data to obtain comparable patient phenotypes. The actual discrepant blood type data will form the basis for a future study of the reasons for blood typing variation.

Indexed as

ABO Blood-Group SystemBlood Grouping and CrossmatchingData MiningDatasets as TopicElectronic Health RecordsHealth Information SystemsHumansMedical Record LinkageNational Institutes of Health (U.S.)Natural Language ProcessingPhenotypeReference ValuesUnited StatesVocabulary, ControlledABO Blood-Group System

Identifiers

PMID26262113
PMCPMC5502805

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.