Evidence map›Paper›PMID 26261345›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Adaptive evolution of malaria parasites in French Guiana: Reversal of chloroquine resistance by acquisition of a mutation in pfcrt.

Stéphane Pelleau, Eli L Moss, Satish K Dhingra, Béatrice Volney, Jessica Casteras, Stanislaw J Gabryszewski, Sarah K Volkman, Dyann F Wirth, Eric Legrand, David A Fidock and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed, 2 pooled it
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 2 syntheses or guidelines pooled it, 146 citations in OpenAlex.

  1. The Global Landscape ofPathogens (Basel, Switzerland) · 2026
    Pooled it
  2. Pooled it
  3. Trial
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Tracking Drug Resistance inInternational journal of molecular sciences · 2025
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  11. Deletion of theAntimicrobial agents and chemotherapy · 2025
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  13. Article
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  15. Review
  16. Sensitive and modular amplicon sequencing ofbioRxiv : the preprint server for biology · 2025
    Article
  17. Systematic in vitro evolution inScience (New York, N.Y.) · 2024
    Article
  18. Review
  19. Article
  20. Article

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Stéphane PelleauLaboratoire de parasitologie, WHO Collaborating Center for Surveillance of Anti-Malarial Drug Resistance, Centre National de Référence du paludisme, Laboratoire associé pour la région Antilles-Guyane, Institut Pasteur de la Guyane, 97300 Cayenne, French Guiana;
Eli L MossGenome Sequencing and Analysis Program, Broad Institute, Cambridge, MA 02142;
Satish K DhingraDepartment of Microbiology and Immunology, Columbia University College of Physicians and Surgeons, New York, NY 10032;
Béatrice VolneyLaboratoire de parasitologie, WHO Collaborating Center for Surveillance of Anti-Malarial Drug Resistance, Centre National de Référence du paludisme, Laboratoire associé pour la région Antilles-Guyane, Institut Pasteur de la Guyane, 97300 Cayenne, French Guiana;
Jessica CasterasLaboratoire de parasitologie, WHO Collaborating Center for Surveillance of Anti-Malarial Drug Resistance, Centre National de Référence du paludisme, Laboratoire associé pour la région Antilles-Guyane, Institut Pasteur de la Guyane, 97300 Cayenne, French Guiana;
Stanislaw J GabryszewskiDepartment of Microbiology and Immunology, Columbia University College of Physicians and Surgeons, New York, NY 10032;
Sarah K VolkmanDepartment of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, MA 02115; Infectious Disease Program, Broad Institute, Cambridge, MA 02142; School of Nursing and Health Sciences, Simmons College, Boston, MA 02115;
Dyann F WirthDepartment of Immunology and Infectious Diseases, Harvard School of Public Health, Boston, MA 02115; Infectious Disease Program, Broad Institute, Cambridge, MA 02142;
Eric LegrandLaboratoire de parasitologie, WHO Collaborating Center for Surveillance of Anti-Malarial Drug Resistance, Centre National de Référence du paludisme, Laboratoire associé pour la région Antilles-Guyane, Institut Pasteur de la Guyane, 97300 Cayenne, French Guiana;
David A FidockDepartment of Microbiology and Immunology, Columbia University College of Physicians and Surgeons, New York, NY 10032; Division of Infectious Diseases, Department of Medicine, Columbia University College of Physicians and Surgeons, New York, NY 10032.
Daniel E NeafseyGenome Sequencing and Analysis Program, Broad Institute, Cambridge, MA 02142;
Lise MussetLaboratoire de parasitologie, WHO Collaborating Center for Surveillance of Anti-Malarial Drug Resistance, Centre National de Référence du paludisme, Laboratoire associé pour la région Antilles-Guyane, Institut Pasteur de la Guyane, 97300 Cayenne, French Guiana; lisemusset@gmail.com.
Institut Pasteur de la Guyane · GFBroad Institute · USColumbia University · USHarvard University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
Role of pfcrt in chloroquine resistance in P. falciparumR01AI050234 · NIAID · YESHIVA UNIVERSITY · PI FIDOCK, DAVID A · 2001 to 2015
$5.7M
Defining the Role of PfCRT and PfMDR1 as Pleiotropic Mediators of Plasmodium falciparum Multidrug ResistanceR37AI050234 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI David A Fidock · 2018 to 2026
$4.4M
Defining P. falciparum resistance to artemisinin-based combination therapiesR01AI109023 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FIDOCK, DAVID A · 2014 to 2025
$4.4M
Dissecting the molecular basis of PfCRT-mediated antimalarial drug resistanceF30AI114070 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GABRYSZEWSKI, STANISLAW J · 2015 to 2017
$122k
NIAID NIH HHS F30 AI114070NIAID NIH HHS HHSN272200900018CNIAID NIH HHS R01 AI050234NIAID NIH HHS R01 AI109023NIAID NIH HHS R01AI109023NIAID NIH HHS R01AI50234NIAID NIH HHS R37 AI050234NIGMS NIH HHS T32 GM007367PHS HHS HHSN272200900018C
6 · The paper itself

Abstract

In regions with high malaria endemicity, the withdrawal of chloroquine (CQ) as first-line treatment of Plasmodium falciparum infections has typically led to the restoration of CQ susceptibility through the reexpansion of the wild-type (WT) allele K76 of the chloroquine resistance transporter gene (pfcrt) at the expense of less fit mutant alleles carrying the CQ resistance (CQR) marker K76T. In low-transmission settings, such as South America, drug resistance mutations can attain 100% prevalence, thereby precluding the return of WT parasites after the complete removal of drug pressure. In French Guiana, despite the fixation of the K76T allele, the prevalence of CQR isolates progressively dropped from >90% to <30% during 17 y after CQ withdrawal in 1995. Using a genome-wide association study with CQ-sensitive (CQS) and CQR isolates, we have identified a single mutation in pfcrt encoding a C350R substitution that is associated with the restoration of CQ susceptibility. Genome editing of the CQR reference strain 7G8 to incorporate PfCRT C350R caused a complete loss of CQR. A retrospective molecular survey on 580 isolates collected from 1997 to 2012 identified all C350R mutant parasites as being CQS. This mutation emerged in 2002 and rapidly spread throughout the P. falciparum population. The C350R allele is also associated with a significant decrease in piperaquine susceptibility in vitro, suggesting that piperaquine pressure in addition to potential fitness costs associated with the 7G8-type CQR pfcrt allele may have selected for this mutation. These findings have important implications for understanding the evolutionary dynamics of antimalarial drug resistance.

Indexed as

Evolution, MolecularMutationAllelesChloroquineDrug ResistanceFrench GuianaGenetic MarkersGenomeGenotypeHaplotypesHumansInhibitory Concentration 50MalariaMembrane Transport ProteinsPhenotypePiperazinesChloroquineGenetic MarkersMembrane Transport ProteinsPfCRT protein, Plasmodium falciparumpiperaquinePiperazinesProtozoan ProteinsQuinolinesdrug resistanceevolutionmalariaPfCRTPlasmodium falciparum

Identifiers

PMID26261345
PMCPMC4577156
OpenAlexW1906140483

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.