Evidence map›Paper›PMID 26261340›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

The amino acid sensor GCN2 inhibits inflammatory responses to apoptotic cells promoting tolerance and suppressing systemic autoimmunity.

Buvana Ravishankar, Haiyun Liu, Rahul Shinde, Kapil Chaudhary, Wei Xiao, Jillian Bradley, Marianne Koritzinsky, Michael P Madaio, Tracy L McGaha

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 1 synthesis or guideline pooled it, 159 citations in OpenAlex.

  1. Meta-analysis of blood genome-wide expression profiling studies in pulmonary arterial hypertension.American journal of physiology. Lung cellular and molecular physiology · 2020
    Pooled it
  2. Review
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  10. The Yin-Yang of Stress and Senescence: Integrated Stress Response and SASP Crosstalk in Stem Cell Fate, Regeneration, and Disease.Biocell : official journal of the Sociedades Latinoamericanas de Microscopia Electronica ... et. al · 2026
    Article
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  15. Immunometabolism in systemic lupus erythematosus.Nature reviews. Rheumatology · 2025
    Review
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49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Buvana RavishankarCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Haiyun LiuCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Rahul ShindeCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Kapil ChaudharyCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Wei XiaoCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Jillian BradleyCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912;
Marianne KoritzinskyPrincess Margaret Cancer Center, University Health Network, Toronto, ON, Canada M5G 2M9; Department of Radiation Oncology, Faculty of Medicine, University of Toronto, Toronto, ON, Canada M5T 1P5; Institute of Medical Sciences, Faculty of Medicine, University of Toronto, Toronto, ON, Canada M5S 1A8;
Michael P MadaioSection of Nephrology, Department of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912.
Tracy L McGahaCancer Immunology, Inflammation, and Tolerance Program, Georgia Regents University Cancer Center, Augusta, GA 30912; Section of Nephrology, Department of Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA 30912 tmcgaha@gru.edu.
Georgia Regents Medical Center · USAugusta University · USUniversity of Toronto · CA

Funding

Mechanistic relationships between IDO, GCN2, and mTOR signals in immunity to apoptotic cellsR01AR067763 · NIAMS · UNIVERSITY HEALTH NETWORK · PI MCGAHA, TRACY L · 2015 to 2019
$1.2M
Novel peptide-based strategy to inhibit deleterious TNF signaling in nephrotoxic nephritisR01DK100564 · NIDDK · AUGUSTA UNIVERSITY · PI LUCAS, RUDOLF, MADAIO, MICHAEL P · 2015 to 2017
$684k
The role of GCN2-kinase in antigen presenting cell function and tolerance to selfR21AI105500 · NIAID · AUGUSTA UNIVERSITY · PI MCGAHA, TRACY L · 2013 to 2014
$399k
The role of indoleamine 2-3 dioxygenase in marginal zone-mediated toleranceR56AI092213 · NIAID · AUGUSTA UNIVERSITY · PI MCGAHA, TRACY L · 2011 to 2011
$335k
NIAID NIH HHS AI092213NIAID NIH HHS AI105500NIAID NIH HHS R21 AI105500NIAID NIH HHS R56 AI092213NIAMS NIH HHS R01 AR067763NIDDK NIH HHS R01 DK100564
6 · The paper itself

Abstract

Efficient apoptotic cell clearance and induction of immunologic tolerance is a critical mechanism preventing autoimmunity and associated pathology. Our laboratory has reported that apoptotic cells induce tolerance by a mechanism dependent on the tryptophan catabolizing enzyme indoleamine 2,3 dioxygenase 1 (IDO1) in splenic macrophages (MΦ). The metabolic-stress sensing protein kinase GCN2 is a primary downstream effector of IDO1; thus, we tested its role in apoptotic cell-driven immune suppression. In vitro, expression of IDO1 in MΦs significantly enhanced apoptotic cell-driven IL-10 and suppressed IL-12 production in a GCN2-dependent mechanism. Suppression of IL-12 protein production was due to attenuation of IL-12 mRNA association with polyribosomes inhibiting translation while IL-10 mRNA association with polyribosomes was not affected. In vivo, apoptotic cell challenge drove a rapid, GCN2-dependent stress response in splenic MΦs with increased IL-10 and TGF-β production, whereas myeloid-specific deletion of GCN2 abrogated regulatory cytokine production with provocation of inflammatory T-cell responses to apoptotic cell antigens and failure of long-tolerance induction. Consistent with a role in prevention of apoptotic cell driven autoreactivity, myeloid deletion of GCN2 in lupus-prone mice resulted in increased immune cell activation, humoral autoimmunity, renal pathology, and mortality. In contrast, activation of GCN2 with an agonist significantly reduced anti-DNA autoantibodies and protected mice from disease. Thus, this study implicates a key role for GCN2 signals in regulating the tolerogenic response to apoptotic cells and limiting autoimmunity.

Indexed as

Amino AcidsAnimalsApoptosisAutoimmunityCells, CulturedCytokinesDisease Models, AnimalGene Expression RegulationImmune ToleranceIndoleamine-Pyrrole 2,3,-DioxygenaseInflammationLupus Erythematosus, SystemicMacrophagesMiceMice, Inbred C57BLMice, KnockoutAmino AcidsCytokinesEif2ak4 protein, mousehalofuginoneIDO1 protein, mouseIndoleamine-Pyrrole 2,3,-DioxygenasePiperidinesProtein Serine-Threonine KinasesQuinazolinonesapoptosisautoimmunityimmunometabolismstresstolerance

Identifiers

PMID26261340
PMCPMC4553766
OpenAlexW1878777740

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.