Evidence map›Paper›PMID 26261323›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Structures of two bacterial resistance factors mediating tRNA-dependent aminoacylation of phosphatidylglycerol with lysine or alanine.

Stefanie Hebecker, Joern Krausze, Tatjana Hasenkampf, Julia Schneider, Maike Groenewold, Joachim Reichelt, Dieter Jahn, Dirk W Heinz, Jürgen Moser

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. MprF fromScience advances · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Crystal structure of the Ate1 arginyl-tRNA-protein transferase and arginylation of N-degron substrates.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. RNA-dependent sterol aspartylation in fungi.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Small-Molecule Acetylation by GCN5-RelatedMicrobiology and molecular biology reviews : MMBR · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Stefanie HebeckerInstitute of Microbiology, Technische Universität Braunschweig, 38106 Braunschweig, Germany;
Joern KrauszeDepartment of Molecular Structural Biology, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Tatjana HasenkampfInstitute of Microbiology, Technische Universität Braunschweig, 38106 Braunschweig, Germany;
Julia SchneiderInstitute of Microbiology, Technische Universität Braunschweig, 38106 Braunschweig, Germany;
Maike GroenewoldDepartment of Molecular Structural Biology, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Joachim ReicheltDepartment of Molecular Structural Biology, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Dieter JahnInstitute of Microbiology, Technische Universität Braunschweig, 38106 Braunschweig, Germany;
Dirk W HeinzDepartment of Molecular Structural Biology, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Jürgen MoserInstitute of Microbiology, Technische Universität Braunschweig, 38106 Braunschweig, Germany; j.moser@tu-bs.de.
Technische Universität Braunschweig · DEHelmholtz Centre for Infection Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cytoplasmic membrane is probably the most important physical barrier between microbes and the surrounding habitat. Aminoacylation of the polar head group of the phospholipid phosphatidylglycerol (PG) catalyzed by Ala-tRNA(Ala)-dependent alanyl-phosphatidylglycerol synthase (A-PGS) or by Lys-tRNA(Lys)-dependent lysyl-phosphatidylglycerol synthase (L-PGS) enables bacteria to cope with cationic peptides that are harmful to the integrity of the cell membrane. Accordingly, these synthases also have been designated as multiple peptide resistance factors (MprF). They consist of a separable C-terminal catalytic domain and an N-terminal transmembrane flippase domain. Here we present the X-ray crystallographic structure of the catalytic domain of A-PGS from the opportunistic human pathogen Pseudomonas aeruginosa. In parallel, the structure of the related lysyl-phosphatidylglycerol-specific L-PGS domain from Bacillus licheniformis in complex with the substrate analog L-lysine amide is presented. Both proteins reveal a continuous tunnel that allows the hydrophobic lipid substrate PG and the polar aminoacyl-tRNA substrate to access the catalytic site from opposite directions. Substrate recognition of A-PGS versus L-PGS was investigated using misacylated tRNA variants. The structural work presented here in combination with biochemical experiments using artificial tRNA or artificial lipid substrates reveals the tRNA acceptor stem, the aminoacyl moiety, and the polar head group of PG as the main determinants for substrate recognition. A mutagenesis approach yielded the complementary amino acid determinants of tRNA interaction. These results have broad implications for the design of L-PGS and A-PGS inhibitors that could render microbial pathogens more susceptible to antimicrobial compounds.

Indexed as

R FactorsAminoacylationAminoacyltransferasesBacillusBacterial ProteinsBase SequenceCatalytic DomainCrystallography, X-RayHydrophobic and Hydrophilic InteractionsLysineModels, MolecularMolecular Docking SimulationMolecular Sequence DataMutagenesis, Site-DirectedNucleic Acid ConformationPhosphatidylglycerolsalanyl-phosphatidylglycerol synthase, Pseudomonas aeruginosaAminoacyltransferasesBacterial ProteinsLysinelysylphosphatidylglycerolPhosphatidylglycerolsRecombinant Fusion ProteinsRNA, Transfer, AlaRNA, Transfer, LysA-PGSL-PGSMprFstructuretRNA

Identifiers

PMID26261323
PMCPMC4553816
OpenAlexW1908644813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.