Evidence map›Paper›PMID 26258650›Full record

ArticlePloS one2015

Dysregulation of the Transforming Growth Factor β Pathway in Induced Pluripotent Stem Cells Generated from Patients with Diamond Blackfan Anemia.

Jingping Ge, Marisa Apicella, Jason A Mills, Loïc Garçon, Deborah L French, Mitchell J Weiss, Monica Bessler, Philip J Mason

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

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  11. Review
  12. Critical Issues in Diamond-Blackfan Anemia and Prospects for Novel Treatment.Hematology/oncology clinics of North America · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jingping GeDivision of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Marisa ApicellaDivision of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Jason A MillsDepartment of Pathology and Laboratory Medicine, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Loïc GarçonUPMC University Paris 06, UMR_S938, and Assistance Publique- Hôpitaux de Paris, Paris, France.
Deborah L FrenchDepartment of Pathology and Laboratory Medicine, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Mitchell J WeissDepartment of Hematology, St. Jude Children's Research Hospital, Memphis, Tennessee, United States of America.
Monica BesslerDivision of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Philip J MasonDivision of Hematology, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, United States of America.
Children's Hospital of Philadelphia · USSorbonne Université · FRSt. Jude Children's Research Hospital · US

Funding

MOLECULAR STUDIES OF BONE MARROW FAILURER01CA105312 · NCI · WASHINGTON UNIVERSITY · PI BESSLER, MONICA · 2004 to 2014
$4.9M
THE PATHOGENESIS OF DYSKERATOSIS CONGENITAR01CA106995 · NCI · WASHINGTON UNIVERSITY · PI MASON, PHILIP J · 2005 to 2014
$3.0M
NCI NIH HHS 2R01CA105312NCI NIH HHS 2R01CA106995NCI NIH HHS R01 CA105312NCI NIH HHS R01 CA106995
6 · The paper itself

Abstract

Diamond Blackfan Anemia (DBA) is an inherited bone marrow failure syndrome with clinical features of red cell aplasia and variable developmental abnormalities. Most affected patients have heterozygous loss of function mutations in ribosomal protein genes but the pathogenic mechanism is still unknown. We generated induced pluripotent stem cells from DBA patients carrying RPS19 or RPL5 mutations. Transcriptome analysis revealed the striking dysregulation of the transforming growth factor β (TGFβ) signaling pathway in DBA lines. Expression of TGFβ target genes, such as TGFBI, BAMBI, COL3A1 and SERPINE1 was significantly increased in the DBA iPSCs. We quantified intermediates in canonical and non-canonical TGFβ pathways and observed a significant increase in the levels of the non-canonical pathway mediator p-JNK in the DBA iPSCs. Moreover, when the mutant cells were corrected by ectopic expression of WT RPS19 or RPL5, levels of p-JNK returned to normal. Surprisingly, nuclear levels of SMAD4, a mediator of canonical TGFβ signaling, were decreased in DBA cells due to increased proteolytic turnover. We also observed the up-regulation of TGFβ1R, TGFβ2, CDKN1A and SERPINE1 mRNA, and the significant decrease of GATA1 mRNA in the primitive multilineage progenitors. In summary our observations identify for the first time a dysregulation of the TGFβ pathway in the pathobiology of DBA.

Indexed as

Gene Expression RegulationAnemia, Diamond-BlackfanCell NucleusCyclin-Dependent Kinase Inhibitor p21FibroblastsGATA1 Transcription FactorHematopoietic Stem CellsHeterozygoteHumansInduced Pluripotent Stem CellsModels, MolecularMutationPlasminogen Activator Inhibitor 1Pluripotent Stem CellsProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaCDKN1A protein, humanCyclin-Dependent Kinase Inhibitor p21GATA1 protein, humanGATA1 Transcription FactorPlasminogen Activator Inhibitor 1Protein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type IReceptor, Transforming Growth Factor-beta Type IIribosomal protein L5, humanRibosomal Proteinsribosomal protein S19RNA, MessengerSERPINE1 protein, humanSmad4 ProteinSMAD4 protein, humanTGFB1 protein, humanTransforming Growth Factor beta1

Identifiers

PMID26258650
PMCPMC4530889
OpenAlexW1930307921

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.