Evidence map›Paper›PMID 26258013›Full record

ArticleFEBS open bio2015

Ubiquitin is a versatile scaffold protein for the generation of molecules with de novo binding and advantageous drug-like properties.

Florian Job, Florian Settele, Susan Lorey, Chris Rundfeldt, Lars Baumann, Annette G Beck-Sickinger, Ulrich Haupts, Hauke Lilie, Eva Bosse-Doenecke

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. An edge β-strand mutation turns ubiquitin into a pore-forming amyloid.Protein science : a publication of the Protein Society · 2026
    Article
  2. Article
  3. Efficient Design of AffilinInternational journal of molecular sciences · 2025
    Article
  4. Almost 50 Years of Monomeric Extracellular Ubiquitin (eUb).Pharmaceuticals (Basel, Switzerland) · 2024
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Florian JobInstitute for Biochemistry and Biotechnology/Technical Biochemistry, Martin-Luther-University Halle-Wittenberg, Kurt-Mothes-Straße 3, D-06120 Halle (Saale), Germany.
Florian SetteleScil Proteins GmbH, Heinrich-Damerow-Straße 1, D-06120 Halle (Saale), Germany.
Susan LoreyScil Proteins GmbH, Heinrich-Damerow-Straße 1, D-06120 Halle (Saale), Germany.
Chris RundfeldtScil Proteins GmbH, Heinrich-Damerow-Straße 1, D-06120 Halle (Saale), Germany.
Lars BaumannInstitute of Biochemistry, University of Leipzig, Brüderstraße 34, D-04103 Leipzig, Germany.
Annette G Beck-SickingerInstitute of Biochemistry, University of Leipzig, Brüderstraße 34, D-04103 Leipzig, Germany.
Ulrich HauptsScil Proteins GmbH, Heinrich-Damerow-Straße 1, D-06120 Halle (Saale), Germany.
Hauke LilieInstitute for Biochemistry and Biotechnology/Technical Biochemistry, Martin-Luther-University Halle-Wittenberg, Kurt-Mothes-Straße 3, D-06120 Halle (Saale), Germany.
Eva Bosse-DoeneckeScil Proteins GmbH, Heinrich-Damerow-Straße 1, D-06120 Halle (Saale), Germany.
Leipzig University · DEMartin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the search for effective therapeutic strategies, protein-based biologicals are under intense development. While monoclonal antibodies represent the majority of these drugs, other innovative approaches are exploring the use of scaffold proteins for the creation of binding molecules with tailor-made properties. Ubiquitin is especially suited for this strategy due to several key characteristics. Ubiquitin is a natural serum protein, 100% conserved across the mammalian class and possesses high thermal, structural and proteolytic stability. Because of its small size and lack of posttranslational modifications, it can be easily produced in Escherichia coli. In this work we provide evidence that ubiquitin is safe as tested experimentally in vivo. In contrast to previously published results, we show that, in our hands, ubiquitin does not act as a functional ligand of the chemokine receptor CXCR4. Cellular assays based on different signaling pathways of the receptor were conducted with the natural agonist SDF-1 as a benchmark. In none of the assays could a response to ubiquitin treatment be elicited. Furthermore, intravenous application to mice at high concentrations did not induce any detectable effect on cytokine levels or hematological parameters.

Indexed as

125I-SIB, N-succinimidyl 3-(125iodo)-benzoateBiodistributionCXCR4CXCR4, CXC motif chemokine receptor 4G-protein coupled receptorID, injected doseMCHC, mean corpuscular hemoglobin concentrationMCH, mean corpuscular hemoglobinMCV, mean cell volumePBS, phosphate buffered salineScaffoldSDF-1SDF-1, stromal cell-derived factor 1Ubiquitin

Identifiers

PMID26258013
PMCPMC4522466
OpenAlexW1163064962

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.