Evidence map›Paper›PMID 26257890›Full record

ArticleRSC advances2015

Purification and Structural Characterization of "Simple Catechol", the NGAL-Siderocalin Siderophore in Human Urine.

Guan-Hu Bao, Jonathan Barasch, Jie Xu, Wei Wang, Feng-Lin Hu, Shi-Xian Deng

Abstract read
In one paragraph

Article in RSC advances, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Role of lipocalin-2 in amyotrophic lateral sclerosis.Frontiers in aging neuroscience · 2025
    Review
  2. Review
  3. Article
  4. Article
  5. Iron in Lung Pathology.Pharmaceuticals (Basel, Switzerland) · 2019
    Review
  6. Correlation between the concentrations of lactoferrin and neutrophil gelatinase-associated lipocalin in meconium.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2018
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Guan-Hu BaoAnhui Agricultural University, 130 West Changjiang Road, Hefei, Anhui Province, 230036, China.
Jonathan BaraschCollege of Physicians and Surgeons of Columbia University, 630 West 168 St, New York, USA.
Jie XuAnhui Agricultural University, 130 West Changjiang Road, Hefei, Anhui Province, 230036, China.
Wei WangAnhui Agricultural University, 130 West Changjiang Road, Hefei, Anhui Province, 230036, China.
Feng-Lin HuAnhui Agricultural University, 130 West Changjiang Road, Hefei, Anhui Province, 230036, China.
Shi-Xian DengCollege of Physicians and Surgeons of Columbia University, 630 West 168 St, New York, USA.
Anhui Agricultural University · CNColumbia University · USHefei University · CN

Funding

Transcriptional Regulation of Urothelial Differentiation During Homeostasis and Repair in Response to Urinary Tract InfectionU54DK104309 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI JONATHAN M. BARASCH, ALI G GHARAVI · 2014 to 2026
$17.7M
IRON LIPOCALIN NGAL IN KIDNEY DISEASER01DK073462 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BARASCH, JONATHAN M. · 2007 to 2015
$3.0M
Iron Delivery in the Developing KidneyR01DK092684 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BARASCH, JONATHAN M. · 2012 to 2016
$1.7M
NIDDK NIH HHS R01 DK073462NIDDK NIH HHS R01 DK092684NIDDK NIH HHS U54 DK104309
6 · The paper itself

Abstract

The identification of ligands that bind the protein Neutrophil Gelatinase-Associated Lipocalin (NGAL, Siderocalin, Lipocalin-2) have helped to elucidate its function. NGAL-Siderocalin binds and sequesters the iron loaded bacterial siderophore enterochelin (Ent), defining the protein as an innate immune effector. Simple metabolic catechols can also form tight complexes with NGAL-Siderocalin and ferric iron, suggesting that the protein may act as an iron scavenger even in the absence of Ent. While different catechols have been detected in human urine, they have not been directly purified from a biofluid and demonstrated to ligate iron with NGAL-Siderocalin. This paper describes a "natural products" approach to identify small molecules that mediate iron binding to NGAL-Siderocalin. A 10K filtrate of human urine was subjected to multiple steps of column chromatography and reverse-phase HPLC, guided by NGAL-Siderocalin-iron binding assays and LC-MS detection. The co-factor forming a ternary structure with iron and NGAL-Siderocalin was identified as authentic simple catechol (dihydroxybenze) by ESI-HR-Mass, UV, and NMR spectrometric analysis. Comparison of the binding strengths of different catechols demonstrated that the vicinal-dihydroxyl groups were the key functional groups and that steric compatibilities of the catechol ring have the strongest effect on binding. Although catechol was a known NGAL-Siderocalin co-factor, our purification directly confirmed its presence in urine as well as its capacity to serve as an iron trap with NGAL-Siderocalin.

Indexed as

BindingCatecholEnterochelinFerric IronLipocalin-2NGALPurificationSiderocalin

Identifiers

PMID26257890
PMCPMC4527557
OpenAlexW1994327706

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.