ArticleFrontiers in plant science2015
Identification of novel drought-tolerant-associated SNPs in common bean (Phaseolus vulgaris).
Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.
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Who cites it
22 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Combination of meta-analysis of QTL and GWAS to uncover the genetic architecture of seed yield and seed yield components in common bean.The plant genome · 2023Pooled it
- Editorial: Utilizing machine learning with phenotypic and genotypic data to enhance effective breeding in agricultural and horticultural crops.Frontiers in plant science · 2026Article
- Genomic Prediction of Adaptation in Common Bean (International journal of molecular sciences · 2025Article
- A panomics-driven framework for the improvement of major food legume crops: advances, challenges, and future prospects.Horticulture research · 2025Article
- Screening for Drought Tolerance Within a Common Bean (Plants (Basel, Switzerland) · 2024Article
- Almond By-Products Substrates as Sustainable Amendments for Green Bean Cultivation.Plants (Basel, Switzerland) · 2024Article
- Dissecting the genetic basis of drought responses in common bean using natural variation.Frontiers in plant science · 2023Article
- The aquaporin gene PvXIP1;2 conferring drought resistance identified by GWAS at seedling stage in common bean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Genome-Wide Association Study and Genomic Prediction for Bacterial Wilt Resistance in Common Bean (Frontiers in genetics · 2022Article
- Genome-wide association study for grain mineral content in a Brazilian common bean diversity panel.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Genetic dissection of drought resistance based on root traits at the bud stage in common bean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Field Screen and Genotyping ofInsects · 2021Article
- Common bean SNP alleles and candidate genes affecting photosynthesis under contrasting water regimes.Horticulture research · 2021Article
- Genome-Wide Association Studies of Mineral Content in Common Bean.Frontiers in plant science · 2021Article
- Genome-Wide Association Studies Detect Multiple QTLs for Productivity in Mesoamerican Diversity Panel of Common Bean Under Drought Stress.Frontiers in plant science · 2020Article
- Chloroplast proteins involved in drought stress response in selected cultivars of common bean (3 Biotech · 2019Article
- Single and Multi-trait GWAS Identify Genetic Factors Associated with Production Traits in Common Bean Under Abiotic Stress Environments.G3 (Bethesda, Md.) · 2019Article
- Genome-Wide Association and Regional Heritability Mapping of Plant Architecture, Lodging and Productivity inG3 (Bethesda, Md.) · 2018Article
- Climatic adaptation and ecological descriptors of wild beans from Mexico.Ecology and evolution · 2018Article
- Assessing and Exploiting Functional Diversity in Germplasm Pools to Enhance Abiotic Stress Adaptation and Yield in Cereals and Food Legumes.Frontiers in plant science · 2017Review
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Common bean (Phaseolus vulgaris L.) is a leguminous in high demand for human nutrition and a very important agricultural product. Production of common bean is constrained by environmental stresses such as drought. Although conventional plant selection has been used to increase production yield and stress tolerance, drought tolerance selection based on phenotype is complicated by associated physiological, anatomical, cellular, biochemical, and molecular changes. These changes are modulated by differential gene expression. A common method to identify genes associated with phenotypes of interest is the characterization of Single Nucleotide Polymorphims (SNPs) to link them to specific functions. In this work, we selected two drought-tolerant parental lines from Mesoamerica, Pinto Villa, and Pinto Saltillo. The parental lines were used to generate a population of 282 families (F3:5) and characterized by 169 SNPs. We associated the segregation of the molecular markers in our population with phenotypes including flowering time, physiological maturity, reproductive period, plant, seed and total biomass, reuse index, seed yield, weight of 100 seeds, and harvest index in three cultivation cycles. We observed 83 SNPs with significant association (p < 0.0003 after Bonferroni correction) with our quantified phenotypes. Phenotypes most associated were days to flowering and seed biomass with 58 and 44 associated SNPs, respectively. Thirty-seven out of the 83 SNPs were annotated to a gene with a potential function related to drought tolerance or relevant molecular/biochemical functions. Some SNPs such as SNP28 and SNP128 are related to starch biosynthesis, a common osmotic protector; and SNP18 is related to proline biosynthesis, another well-known osmotic protector.
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