Evidence map›Paper›PMID 26255849›Full record

ArticleCurrent biology : CB2015

DNA Replication Initiation Is Blocked by a Distant Chromosome-Membrane Attachment.

David Magnan, Mohan C Joshi, Anna K Barker, Bryan J Visser, David Bates

Erratum issuedAbstract read
In one paragraph

Article in Current biology : CB, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
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  6. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

David MagnanIntegrative Molecular and Biomedical Sciences, Baylor College of Medicine, Houston, TX 77030, USA.
Mohan C JoshiMolecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Anna K BarkerMolecular Virology and Microbiology, Baylor College of Medicine, Houston, TX 77030, USA.
Bryan J VisserIntegrative Molecular and Biomedical Sciences, Baylor College of Medicine, Houston, TX 77030, USA.
David BatesIntegrative Molecular and Biomedical Sciences, Baylor College of Medicine, Houston, TX 77030, USA; Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: bates@bcm.edu.

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI LEWIS, DOROTHY E. · 1994 to 2015
$21.7M
TRAINING PROGRAM IN CELL AND MOLECULAR BIOLOGYT32GM008231 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN · 1990 to 2019
$7.2M
Dynamics and regulation of sister chromosome cohesion in E. coli.R01GM102679 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BATES, DAVID · 2012 to 2016
$1.5M
Forward Genomics of Damage Control: An Undiscovered Class of Cancer GenesDP1CA174424 · NCI · BAYLOR COLLEGE OF MEDICINE · PI ROSENBERG, SUSAN M · 2012 to 2013
$1.5M
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
NCI NIH HHS DP1 CA174424NCI NIH HHS DP1-CA174424NCI NIH HHS P30 CA125123NCI NIH HHS P30CA125123NCRR NIH HHS S10 RR024574NCRR NIH HHS S10RR024574NIAID NIH HHS AI036211NIAID NIH HHS P30 AI036211NIGMS NIH HHS R01 GM102679NIGMS NIH HHS R01GM102679NIGMS NIH HHS T32 GM008231
6 · The paper itself

Abstract

Although it has been recognized for several decades that chromosome structure regulates the capacity of replication origins to initiate, very little is known about how or if cells actively regulate structure to direct initiation. We report that a localized inducible protein tether between the chromosome and cell membrane in E. coli cells imparts a rapid and complete block to replication initiation. Tethers, composed of a trans-membrane and transcription repressor fusion protein bound to an array of operator sequences, can be placed up to 1 Mb from the origin with no loss of penetrance. Tether-induced initiation blocking has no effect on elongation at pre-existing replication forks and does not cause cell or DNA damage. Whole-genome and site-specific fluorescent DNA labeling in tethered cells indicates that global nucleoid structure and chromosome organization are disrupted. Gene expression patterns, assayed by RNA sequencing, show that tethering induces global supercoiling changes, which are likely incompatible with replication initiation. Parallels between tether-induced initiation blocking and rifampicin treatment and the role of programmed changes in chromosome structure in replication control are discussed.

Indexed as

DNA ReplicationReplication OriginCell MembraneChromosomes, BacterialDNA, BacterialEscherichia coliDNA, Bacterial

Identifiers

PMID26255849
PMCPMC4546506

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.