Evidence map›Paper›PMID 26254985›Full record

ArticleMolecular immunology2015

Duck TRIM27-L enhances MAVS signaling and is absent in chickens and turkeys.

Alysson H Blaine, Domingo Miranzo-Navarro, Lee K Campbell, Jerry R Aldridge, Robert G Webster, Katharine E Magor

Abstract read
In one paragraph

Article in Molecular immunology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.1field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Concurrent loss of ciliary genesRoyal Society open science · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Alysson H BlaineDepartment of Biological Sciences, University of Alberta, Edmonton AB T6G 2E9, Canada.
Domingo Miranzo-NavarroDepartment of Biological Sciences, University of Alberta, Edmonton AB T6G 2E9, Canada.
Lee K CampbellDepartment of Biological Sciences, University of Alberta, Edmonton AB T6G 2E9, Canada.
Jerry R AldridgeDivision of Virology, Department of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Robert G WebsterDivision of Virology, Department of Infectious Diseases, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.
Katharine E MagorDepartment of Biological Sciences, University of Alberta, Edmonton AB T6G 2E9, Canada. Electronic address: kmagor@ualberta.ca.
University of Alberta · CASt. Jude Children's Research Hospital · US

Funding

NIAID NIH HHS HHSN266200700005CNIAID NIH HHS HHSN272201400006CPHS HHS HHSN272201400006C
6 · The paper itself

Abstract

Wild waterfowl, including mallard ducks, are the natural reservoir of avian influenza A virus and they are resistant to strains that would cause fatal infection in chickens. Here we investigate potential involvement of TRIM proteins in the differential response of ducks and chickens to influenza. We examine a cluster of TRIM genes located on a single scaffold in the duck genome, which is a conserved synteny group with a TRIM cluster located in the extended MHC region in chickens and turkeys. We note a TRIM27-like gene is present in ducks, and absent in chickens and turkeys. Orthologous genes are predicted in many birds and reptiles, suggesting the gene has been lost in chickens and turkeys. Using quantitative real-time PCR (qPCR) we show that TRIM27-L, and the related TRIM27.1, are upregulated 5- and 9-fold at 1 day post-infection with highly pathogenic A/Vietnam/1203/2004. To assess whether TRIM27.1 or TRIM27-L are involved in modulation of antiviral gene expression, we overexpressed them in DF1 chicken cells, and neither show any direct effect on innate immune gene expression. However, when co-transfected with duck RIG-I-N (d2CARD) to constitutively activate the MAVS pathway, TRIM27.1 weakly decreases, while TRIM27-L strongly activates innate immune signaling leading to increased transcription of antiviral genes MX1 and IFN-β. Furthermore, when both are co-expressed, the activation of the MAVS signaling pathway by TRIM27-L over-rides the inhibition by TRIM27.1. Thus, ducks have an activating TRIM27-L to augment MAVS signaling following RIG-I detection, while chickens lack both TRIM27-L and RIG-I itself.

Indexed as

Signal TransductionAdaptor Proteins, Signal TransducingAnimalsChickensDNA-Binding ProteinsDucksInfluenza in BirdsMajor Histocompatibility ComplexMultigene FamilyPhylogenyRNA HelicasesRNA, MessengerTurkeysUp-RegulationAdaptor Proteins, Signal TransducingDNA-Binding ProteinsRNA HelicasesRNA, MessengerAvian immunologyEvolutionInfluenza AInnate immune modulationMAVS signaling pathwayTRIM27Tripartite-motif family

Identifiers

PMID26254985
PMCPMC4577026
OpenAlexW1437920260

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.