Evidence map›Paper›PMID 26252218›Full record

ArticlePloS one2015

Mutation Spectrum of Common Deafness-Causing Genes in Patients with Non-Syndromic Deafness in the Xiamen Area, China.

Yi Jiang, Shasha Huang, Tao Deng, Lihua Wu, Juan Chen, Dongyang Kang, Xiufeng Xu, Ruiyu Li, Dongyi Han, Pu Dai

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

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  14. Mutation spectra and founder effect of TMC1 in patients with non-syndromic deafness in Xiamen area, China.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Yi JiangDepartment of Otolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China; Fujian Medical University ShengLi clinical college, Fujian Provincial Hospital, Fuzhou, P. R. China.
Shasha HuangDepartment of Otolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Tao DengBeijing Capital Bio Independent Clinical Laboratory, Beijing, P. R. China.
Lihua WuFujian Medical University ShengLi clinical college, Fujian Provincial Hospital, Fuzhou, P. R. China.
Juan ChenFujian Medical University ShengLi clinical college, Fujian Provincial Hospital, Fuzhou, P. R. China.
Dongyang KangDepartment of Otolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Xiufeng XuBeijing Capital Bio Independent Clinical Laboratory, Beijing, P. R. China.
Ruiyu LiFujian Medical University ShengLi clinical college, Fujian Provincial Hospital, Fuzhou, P. R. China.
Dongyi HanDepartment of Otolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Pu DaiDepartment of Otolaryngology, Head and Neck Surgery, PLA General Hospital, Beijing, P. R. China.
Chinese PLA General Hospital · CNFujian Medical University · CNFujian Provincial Hospital · CN

Funding

Impact of Prenatal Alcohol Exposure on Receptor Targeting and FunctioningR03AA020101 · NIAAA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI CALDWELL, KEVIN K. · 2010 to 2011
$148k
NIAAA NIH HHS R03 AA020101
6 · The paper itself

Abstract

In China, approximately 30,000 babies are born with hearing impairment each year. However, the molecular factors causing congenital hearing impairment in the Xiamen area of Fujian province have not been evaluated. To provide accurate genetic testing and counseling in the Xiamen area, we investigated the molecular etiology of non-syndromic deafness in a deaf population from Xiamen. Unrelated students with hearing impairment (n = 155) who attended Xiamen Special Education School in Fujian Province were recruited for this study. Three common deafness-related genes, GJB2, SLC26A4, and mtDNA12SrRNA, were analyzed using all-exon sequencing. GJB2 mutations were detected in 27.1% (42/155) of the entire cohort. The non-syndromic hearing loss (NSHL) hotspot mutations c.109G>A (p.V37I) and c.235delC were found in this population, whereas the Caucasian hotspot mutation c.35delG was not. The allelic frequency of the c.109G>A mutation was 9.03% (28/310), slightly higher than that of c.235delC (8.39%, 26/310), which is the most common GJB2 mutation in most areas of China. The allelic frequency of the c.109G>A mutation was significantly higher in this Xiamen's deaf population than that in previously reported cohorts (P = 0.00). The SLC26A4 mutations were found in 16.77% (26/155) of this cohort. The most common pathogenic allele was c.IVS7-2A>G (6.13%, 19/310), and the second most common was the c.1079C>T (p.A360V) mutation (1.94%, 6/310) which has rarely been reported as a hotspot mutation in other studies. The mutation rate of mtDNA12SrRNA in this group was 3.87% (6/155), all being the m.A1555G mutation. These findings show the specificity of the common deaf gene-mutation spectrum in this area. According to this study, there were specific hotspot mutations in Xiamen deaf patients. Comprehensive sequencing analysis of the three common deaf genes can help portray the mutation spectrum and develop optimal testing strategies for deaf patients in this area.

Indexed as

DNA Mutational AnalysisAdolescentAdultAllelesAmino Acid SequenceChildChild, PreschoolChinaCohort StudiesConnexin 26ConnexinsDeafnessExonsFemaleGene FrequencyHumansConnexin 26ConnexinsGJB2 protein, humanMembrane Transport ProteinsRNARNA, MitochondrialRNA, RibosomalRNA, ribosomal, 12SSLC26A4 protein, humanSulfate Transporters

Identifiers

PMID26252218
PMCPMC4529078
OpenAlexW1919344005

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.