Evidence map›Paper›PMID 26251504›Full record

ArticleGenome announcements2015

Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina.

Louis S Tisa, Nicholas Beauchemin, Michael N Cantor, Teal Furnholm, Faten Ghodhbane-Gtari, Lynne Goodwin, Alex Copeland, Maher Gtari, Marcel Huntemann, Natalia Ivanova and 16 more

Abstract read
In one paragraph

Article in Genome announcements, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. International journal of molecular sciences · 2023
    Article
  3. Draft Genomes ofJournal of genomics · 2023
    Article
  4. Draft Genomes of SymbioticJournal of genomics · 2022
    Article
  5. Article
  6. Review
  7. Permanent draft genome sequence ofStandards in genomic sciences · 2017
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Louis S TisaUniversity of New Hampshire, Durham, New Hampshire, USA louis.tisa@unh.edu.
Nicholas BeaucheminUniversity of New Hampshire, Durham, New Hampshire, USA.
Michael N CantorLos Alamos National Laboratory, Los Alamos, New Mexico, USA.
Teal FurnholmUniversity of New Hampshire, Durham, New Hampshire, USA.
Faten Ghodhbane-GtariUniversity of New Hampshire, Durham, New Hampshire, USA University of Tunis-El Manar, El Manar, Tunisia.
Lynne GoodwinLos Alamos National Laboratory, Los Alamos, New Mexico, USA.
Alex CopelandDOE Joint Genome Institute, Walnut Creek, California, USA.
Maher GtariUniversity of New Hampshire, Durham, New Hampshire, USA University of Tunis-El Manar, El Manar, Tunisia.
Marcel HuntemannDOE Joint Genome Institute, Walnut Creek, California, USA.
Natalia IvanovaDOE Joint Genome Institute, Walnut Creek, California, USA.
Nikos KyrpidesDOE Joint Genome Institute, Walnut Creek, California, USA.
Victor MarkowitzDOE Joint Genome Institute, Walnut Creek, California, USA.
Kostas MavrommatisDOE Joint Genome Institute, Walnut Creek, California, USA.
Natalia MikhailovaDOE Joint Genome Institute, Walnut Creek, California, USA.
Imen NouiouiUniversity of Tunis-El Manar, El Manar, Tunisia.
Rediet OshoneUniversity of New Hampshire, Durham, New Hampshire, USA.
Galina OvchinnikovaDOE Joint Genome Institute, Walnut Creek, California, USA.
Ioanna PaganiDOE Joint Genome Institute, Walnut Creek, California, USA.
Krishnaveni PalaniappanDOE Joint Genome Institute, Walnut Creek, California, USA.
Amrita PatiDOE Joint Genome Institute, Walnut Creek, California, USA.
Arnab SenUniversity of North Bengal, Siliguri, India.
Nicole ShapiroDOE Joint Genome Institute, Walnut Creek, California, USA.
Ernest SzetoDOE Joint Genome Institute, Walnut Creek, California, USA.
Luis WallUniversity of Quilmes, Buenos Aires, Argentina.
Jessie WishartUniversity of New Hampshire, Durham, New Hampshire, USA.
Tanja WoykeDOE Joint Genome Institute, Walnut Creek, California, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Frankia sp. strain DC12, isolated from root nodules of Datisca cannabina, is a member of the fourth lineage of Frankia, which is unable to reinfect actinorhizal plants. Here, we report its 6.88-Mbp high-quality draft genome sequence, with a G+C content of 71.92% and 5,858 candidate protein-coding genes.

Identifiers

PMID26251504
PMCPMC4541282

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.