Evidence map›Paper›PMID 26251171›Full record

ArticleBMC genomics2015

Effect of 90Sr internal emitter on gene expression in mouse blood.

Shanaz A Ghandhi, Waylon Weber, Dunstana Melo, Melanie Doyle-Eisele, Mashkura Chowdhury, Raymond Guilmette, Sally A Amundson

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Adsorption of SrInternational journal of molecular sciences · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Transcriptomics for radiation biodosimetry: progress and challenges.International journal of radiation biology · 2023
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Gene Expression Studies for the Development of Particle Therapy.International journal of particle therapy · 2018
    Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shanaz A GhandhiCenter for Radiological Research, Columbia University Medical Center, VC11-215, 630 West 168th Street, New York, NY, 10032, USA. sg2423@cumc.columbia.edu.
Waylon WeberLovelace Respiratory Research Institute, Albuquerque, NM, 87108, USA. wweber@lrri.org.
Dunstana MeloLovelace Respiratory Research Institute, Albuquerque, NM, 87108, USA. dmelo@lrri.org.
Melanie Doyle-EiseleLovelace Respiratory Research Institute, Albuquerque, NM, 87108, USA. mdoyle@lrri.org.
Mashkura ChowdhuryCenter for Radiological Research, Columbia University Medical Center, VC11-215, 630 West 168th Street, New York, NY, 10032, USA. mc3102@columbia.edu.
Raymond GuilmetteLovelace Respiratory Research Institute, Albuquerque, NM, 87108, USA. rayguilmette7530@gmail.com.
Sally A AmundsonCenter for Radiological Research, Columbia University Medical Center, VC11-215, 630 West 168th Street, New York, NY, 10032, USA. saa2108@cumc.columbia.edu.
Lovelace Respiratory Research Institute · USColumbia University Irving Medical Center · US

Funding

Sample Engineering CoreU19AI067773 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FORNACE, ALBERT J · 2005 to 2024
$105.4M
NIAID NIH HHS U19 AI067773NIAID NIH HHS U19AI067773
6 · The paper itself

Abstract

backgroundThe radioactive isotope Strontium-90 ((90)Sr) may be released as a component of fallout from nuclear accidents, or in the event of a radiological incident such as detonation of an improvised nuclear device, and if ingested poses a significant health risk to exposed individuals. In order to better understand the response to (90)Sr, using an easily attainable and standard biodosimetry sample fluid, we analyzed the global transcriptomic response of blood cells in an in vivo model system.

resultsWe injected C57BL/6 mice with a solution of 90SrCl2 and followed them over a 30-day period. At days 4, 7, 9, 25 and 30, we collected blood and isolated RNA for microarray analyses. These days corresponded to target doses in a range from 1-5 Gy. We investigated changes in mRNA levels using microarrays, and changes in specific microRNA (miRNA) predicted to be involved in the response using qRT-PCR. We identified 8082 differentially expressed genes in the blood of mice exposed to (90)Sr compared with controls. Common biological functions were affected throughout the study, including apoptosis of B and T lymphocytes, and atrophy of lymphoid organs. Cellular functions such as RNA degradation and lipid metabolism were also affected during the study. The broad down regulation of genes observed in our study suggested a potential role for miRNA in gene regulation. We tested candidate miRNAs, mmu-miR-16, mmu-miR-124, mmu-miR-125 and mmu-mir-21; and found that all were induced at the earliest time point, day 4.

conclusionsOur study is the first to report the transcriptomic response of blood cells to the internal emitter (90)Sr in mouse and a possible role for microRNA in gene regulation after (90)Sr exposure. The most dramatic effect was observed on gene expression related to B-cell development and RNA maintenance. These functions were affected by genes that were down regulated throughout the study, suggesting severely compromised antigen response, which may be a result of the deposition of the radioisotope proximal to the hematopoietic compartment in bone.

Indexed as

AnimalsApoptosisB-LymphocytesGene ExpressionGene Expression ProfilingGene Expression RegulationLipid MetabolismMiceMice, Inbred C57BLMicroRNAsRadioactive Hazard ReleaseRNA, MessengerStrontium IsotopesT-LymphocytesMicroRNAsRNA, MessengerStrontium Isotopes

Identifiers

PMID26251171
PMCPMC4528784
OpenAlexW1864308025

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.