Evidence map›Paper›PMID 26249699›Full record

ArticleActa crystallographica. Section F, Structural biology communications2015

Structure of BbKI, a disulfide-free plasma kallikrein inhibitor.

Dongwen Zhou, Daiane Hansen, Ivan G Shabalin, Alla Gustchina, Debora F Vieira, Marlon V de Brito, Ana Paula U Araújo, Maria Luiza V Oliva, Alexander Wlodawer

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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  3. International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Dongwen ZhouMacromolecular Crystallography Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA.
Daiane HansenUniversidade Federal de São Paulo-Escola Paulista de Medicina, Rua Três de Maio 100, 04044-020 São Paulo-SP, Brazil.
Ivan G ShabalinDepartment of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, VA 22908, USA.
Alla GustchinaMacromolecular Crystallography Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA.
Debora F VieiraInstitute of Physics of São Carlos, University of São Paulo, Avenida Trabalhador Sãocarlense 400, 13560-970 São Carlos-SP, Brazil.
Marlon V de BritoInstitute of Physics of São Carlos, University of São Paulo, Avenida Trabalhador Sãocarlense 400, 13560-970 São Carlos-SP, Brazil.
Ana Paula U AraújoInstitute of Physics of São Carlos, University of São Paulo, Avenida Trabalhador Sãocarlense 400, 13560-970 São Carlos-SP, Brazil.
Maria Luiza V OlivaUniversidade Federal de São Paulo-Escola Paulista de Medicina, Rua Três de Maio 100, 04044-020 São Paulo-SP, Brazil.
Alexander WlodawerMacromolecular Crystallography Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD 21702, USA.
Institute of Physics · PLCenter for Cancer Research · USUniversidade Federal de São Paulo · BRNational Cancer Institute · USUniversity of Virginia · US

Funding

Protein StructureZIABC010348 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI WLODAWER, ALEXANDER · 2009 to 2025
$27.5M
Intramural NIH HHS
6 · The paper itself

Abstract

A serine protease inhibitor from Bauhinia bauhinioides (BbKI) belongs to the Kunitz family of plant inhibitors, which are common in plant seeds. BbKI does not contain any disulfides, unlike most other members of this family. It is a potent inhibitor of plasma kallikrein, in addition to other serine proteases, and thus exhibits antithrombotic activity. A high-resolution crystal structure of recombinantly expressed BbKI was determined (at 1.4 Å resolution) and was compared with the structures of other members of the family. Modeling of a complex of BbKI with plasma kallikrein indicates that changes in the local structure of the reactive loop that includes the specificity-determining Arg64 are necessary in order to explain the tight binding. An R64A mutant of BbKI was found to be a weaker inhibitor of plasma kallikrein, but was much more potent against plasmin, suggesting that this mutant may be useful for preventing the breakup of fibrin and maintaining clot stability, thus preventing excessive bleeding.

Indexed as

Amino Acid MotifsBase SequenceBauhiniaBinding SitesCloning, MolecularCrystallizationCrystallography, X-RayEscherichia coliFibrinolysinFibrinolytic AgentsGene ExpressionHumansModels, MolecularMolecular Sequence DataMutationPlant ProteinsBbKI protein, Bauhinia bauhinioidesFibrinolysinFibrinolytic AgentsPlant ProteinsPlasma KallikreinRecombinant Proteinscrystal structurekallikreinKunitz inhibitorβ-trefoil

Identifiers

PMID26249699
PMCPMC4528941
OpenAlexW1083832091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.