Evidence map›Paper›PMID 26248207›Full record

ArticleMechanisms of development2015

The transcriptional coactivator Taz regulates proximodistal patterning of the pronephric tubule in zebrafish.

Jiaojiao Zhang, Shipeng Yuan, Aleksandr Vasilyev, M Amin Arnaout

Open access · greenAbstract read
In one paragraph

Article in Mechanisms of development, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Frontiers in endocrinology · 2018
    Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jiaojiao ZhangLeukocyte Biology & Inflammation Program, Division of Nephrology, Department of Medicine, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, United States.
Shipeng YuanLeukocyte Biology & Inflammation Program, Division of Nephrology, Department of Medicine, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, United States.
Aleksandr VasilyevLeukocyte Biology & Inflammation Program, Division of Nephrology, Department of Medicine, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, United States; Department of Pathology, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, United States.
M Amin ArnaoutLeukocyte Biology & Inflammation Program, Division of Nephrology, Department of Medicine, Massachusetts General Hospital, 149 13th Street, Charlestown, MA 02129, United States; Department of Developmental and Regenerative Biology, Harvard Medical School, Boston, MA 02115, United States. Electronic address: aarnaout1@mgh.harvard.edu.
Massachusetts General Hospital · USHarvard University · US

Funding

TRAINING IN CELL STRUCTURE AND FUNCTION IN NEPHROLOGYT32DK007540 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI BROWN, DENNIS, SOBERMAN, ROY · 1986 to 2021
$7.2M
Structure and Function of beta2 IntegrinR01DK048549 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 1994 to 2016
$6.0M
Structure and Function of Integrins in the KidneyR01DK088327 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 2010 to 2025
$5.3M
Pathogenesis of ADPKD-role of the transcriptional modulator TAZR01DK075999 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 2007 to 2010
$1.1M
A novel epithelial cell migration drives nephron repatterning and convolutionK08DK082782 · NIDDK · NEW YORK INST OF TECHNOLOGY · PI VASILYEV, ALEKSANDR · 2009 to 2013
$696k
Zebrafish model of acute kidney injuryR03DK097443 · NIDDK · NEW YORK INST OF TECHNOLOGY · PI VASILYEV, ALEKSANDR · 2013 to 2014
$151k
NIDDK NIH HHS DK007540NIDDK NIH HHS DK088327NIDDK NIH HHS K08 DK082782NIDDK NIH HHS K08DK082782NIDDK NIH HHS R01 DK048549NIDDK NIH HHS R01 DK075999NIDDK NIH HHS R01 DK088327NIDDK NIH HHS R03DK097443NIDDK NIH HHS T32 DK007540
6 · The paper itself

Abstract

The zebrafish pronephric tubule consists of proximal and distal segments and a collecting duct. The proximal segment is subdivided into the neck, proximal convoluted tubule (PCT) and proximal straight tubule (PST) segments. The distal segment consists of the distal-early (DE) and distal-late (DL) segments. How the proximal and distal segments develop along the anteroposterior axis is poorly understood. Here we show that knockdown of taz in zebrafish caused shortening and a significant reduction in the number of principal cells of the PST-DE segment, and proximalization of the pronephric tubule in 24 hpf embryos. RA treatment expanded the pronephric proximal domain in normal embryos as in taz morphants, an effect that was further enhanced upon exposure of taz morphants to RA. The early pronephric defects in 24 hpf taz morphants led to the failure of anterior pronephric tubule migration and convolution, and to PCT dilation and cyst formation in older embryos. In situ hybridization showed weak and transient expression of taz at the bud stage in the intermediate mesoderm, the source of pronephric progenitors. The present findings show that Taz is required in the anteroposterior patterning of the pronephric progenitor domain in the intermediate mesoderm, acting in part by regulating RA signaling in the pronephric progenitor field in the intermediate mesoderm.

Indexed as

AnimalsAnimals, Genetically ModifiedBody PatterningCell CountGene Expression Regulation, DevelopmentalGene Knockdown TechniquesIntracellular Signaling Peptides and ProteinsKidney TubulesMesodermPronephrosTranscriptional Coactivator with PDZ-Binding Motif ProteinsTretinoinZebrafishZebrafish ProteinsIntracellular Signaling Peptides and ProteinsTranscriptional Coactivator with PDZ-Binding Motif ProteinsTretinoinWWTR1 protein, zebrafishZebrafish ProteinsKidney cystsPatterningPronephrosTazZebrafish

Identifiers

PMID26248207
PMCPMC4679655
OpenAlexW1086425921

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.