Evidence map›Paper›PMID 26248042›Full record

ArticlePloS one2015

Calcineurin Undergoes a Conformational Switch Evoked via Peptidyl-Prolyl Isomerization.

Alicia Guasch, Álvaro Aranguren-Ibáñez, Rosa Pérez-Luque, David Aparicio, Sergio Martínez-Høyer, M Carmen Mulero, Eva Serrano-Candelas, Mercè Pérez-Riba, Ignacio Fita

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functional and Regulatory Roles of Fold-Switching Proteins.Structure (London, England : 1993) · 2021
    Review
  5. Inaccurate secondary structure predictions often indicate protein fold switching.Protein science : a publication of the Protein Society · 2019
    Article
  6. FKBP12 contributes to α-synuclein toxicity by regulating the calcineurin-dependent phosphoproteome.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Alicia GuaschInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Parc Científic, Baldiri Reixac 10, 08028, Barcelona, Spain.
Álvaro Aranguren-IbáñezHuman Molecular Genetics Laboratory, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Gran Via de L'Hospitalet 199, L'Hospitalet de Llobregat, 08908, Barcelona, Spain.
Rosa Pérez-LuqueInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Parc Científic, Baldiri Reixac 10, 08028, Barcelona, Spain.
David AparicioInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Parc Científic, Baldiri Reixac 10, 08028, Barcelona, Spain.
Sergio Martínez-HøyerHuman Molecular Genetics Laboratory, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Gran Via de L'Hospitalet 199, L'Hospitalet de Llobregat, 08908, Barcelona, Spain.
M Carmen MuleroHuman Molecular Genetics Laboratory, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Gran Via de L'Hospitalet 199, L'Hospitalet de Llobregat, 08908, Barcelona, Spain.
Eva Serrano-CandelasHuman Molecular Genetics Laboratory, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Gran Via de L'Hospitalet 199, L'Hospitalet de Llobregat, 08908, Barcelona, Spain.
Mercè Pérez-RibaHuman Molecular Genetics Laboratory, Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Gran Via de L'Hospitalet 199, L'Hospitalet de Llobregat, 08908, Barcelona, Spain.
Ignacio FitaInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Parc Científic, Baldiri Reixac 10, 08028, Barcelona, Spain.
Institut d'Investigació Biomédica de Bellvitge · ESInstitut de Biologia Molecular de Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A limited repertoire of PPP family of serine/threonine phosphatases with a highly conserved catalytic domain acts on thousands of protein targets to orchestrate myriad central biological roles. A major structural reorganization of human calcineurin, a ubiquitous Ser/Thr PPP regulated by calcium and calmodulin and targeted by immunosuppressant drugs cyclosporin A and FK506, is unveiled here. The new conformation involves trans- to cis-isomerization of proline in the SAPNY sequence, highly conserved across PPPs, and remodels the main regulatory site where NFATc transcription factors bind. Transitions between cis- and trans-conformations may involve peptidyl prolyl isomerases such as cyclophilin A and FKBP12, which are known to physically interact with and modulate calcineurin even in the absence of immunosuppressant drugs. Alternative conformations in PPPs provide a new perspective on interactions with substrates and other protein partners and may foster development of more specific inhibitors as drug candidates.

Indexed as

Amino Acid SequenceBinding SitesCalcineurinCatalytic DomainCrystallography, X-RayCyclophilin ACyclosporineHEK293 CellsHumansIsomerismMolecular Dynamics SimulationMolecular Sequence DataNFATC Transcription FactorsProtein BindingProtein IsoformsRecombinant ProteinsCalcineurinCyclophilin ACyclosporineNFATC Transcription FactorsProtein IsoformsRecombinant ProteinsTacrolimus Binding Protein 1A

Identifiers

PMID26248042
PMCPMC4527731
OpenAlexW1103322896

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.