Evidence map›Paper›PMID 26247782›Full record

ArticlePLoS genetics2015

SLIRP Regulates the Rate of Mitochondrial Protein Synthesis and Protects LRPPRC from Degradation.

Marie Lagouge, Arnaud Mourier, Hyun Ju Lee, Henrik Spåhr, Timothy Wai, Christian Kukat, Eduardo Silva Ramos, Elisa Motori, Jakob D Busch, Stefan Siira and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 1 synthesis or guideline pooled it, 117 citations in OpenAlex.

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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Marie LagougeDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Arnaud MourierDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Hyun Ju LeeDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Henrik SpåhrDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Timothy WaiCECAD Research Center, University of Cologne, Cologne, Germany.
Christian KukatFACS and Imaging facility, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Eduardo Silva RamosDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Elisa MotoriDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Jakob D BuschDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany.
Stefan SiiraHarry Perkins Institute of Medical Research, Centre for Medical Research and School of Chemistry and Biochemistry, The University of Western Australia, Perth, Australia.
German Mouse Clinic Consortium
Elisabeth KremmerHelmholtz Zentrum München, Institute of Molecular Immunology, Munich, Germany.
Aleksandra FilipovskaHarry Perkins Institute of Medical Research, Centre for Medical Research and School of Chemistry and Biochemistry, The University of Western Australia, Perth, Australia.
Nils-Göran LarssonDepartment of Mitochondrial Biology, Max Planck Institute for Biology of Ageing, Cologne, Germany; Department of Laboratory Medicine, Karolinska Institute, Stockholm, Sweden.
Max Planck Institute for Biology of Ageing · DEUniversity of Western Australia · AUCologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases · DEHelmholtz Zentrum München · DEKarolinska Institutet · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have studied the in vivo role of SLIRP in regulation of mitochondrial DNA (mtDNA) gene expression and show here that it stabilizes its interacting partner protein LRPPRC by protecting it from degradation. Although SLIRP is completely dependent on LRPPRC for its stability, reduced levels of LRPPRC persist in the absence of SLIRP in vivo. Surprisingly, Slirp knockout mice are apparently healthy and only display a minor weight loss, despite a 50-70% reduction in the steady-state levels of mtDNA-encoded mRNAs. In contrast to LRPPRC, SLIRP is dispensable for polyadenylation of mtDNA-encoded mRNAs. Instead, deep RNA sequencing (RNAseq) of mitochondrial ribosomal fractions and additional molecular analyses show that SLIRP is required for proper association of mRNAs to the mitochondrial ribosome and efficient translation. Our findings thus establish distinct functions for SLIRP and LRPPRC within the LRPPRC-SLIRP complex, with a novel role for SLIRP in mitochondrial translation. Very surprisingly, our results also demonstrate that mammalian mitochondria have a great excess of transcripts under basal physiological conditions in vivo.

Indexed as

AnimalsCells, CulturedFemaleGene Expression RegulationMaleMice, Inbred C57BLMice, KnockoutMitochondrial ProteinsNeoplasm ProteinsPolyadenylationProtein BiosynthesisProteolysisRibosomesRNA-Binding ProteinsRNA, MessengerRNA StabilityLrpprc protein, mouseMitochondrial ProteinsNeoplasm ProteinsRNA-Binding ProteinsRNA, MessengerSLIRP protein, mouse

Identifiers

PMID26247782
PMCPMC4527767
OpenAlexW2117868619

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.