ArticleGenome biology and evolution2015
Highly Conserved Mitochondrial Genomes among Multicellular Red Algae of the Florideophyceae.
Article in Genome biology and evolution, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.
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39 citing papers in PubMed, 93 citations in OpenAlex.
- Mitogenome structure and phylogenomics of the order Thoreales (Nemaliophycidae, Rhodophyta).Journal of phycology · 2026Article
- Organellar Genome Analysis of the Red AlgaLife (Basel, Switzerland) · 2026Article
- The evolutionary path of widespread IR heteroplasmy of chloroplast genomes in the context of Rhodophyta phylogeny.Journal of molecular evolution · 2026Article
- The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2026Article
- Species-specific marker development for accurate identification of three red algae (Marine life science & technology · 2025Article
- Scaling Up Species Delimitation From DNA Barcodes to Whole Organelle Genomes: Strong Evidence for Discordance Among Genes and Methods for the Red Alga Dasyclonium.Molecular ecology resources · 2025Article
- Article
- Transcriptomic analysis of Virescentia guangxiensis (Rhodophyta: Batrachospermales) revealed differential expression of genes in gametophyte and chantransia life phases.BMC genomics · 2025Article
- The first mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2025Article
- Mitogenome features and phylogenetic analysis of red algae,Journal of genetics · 2024Article
- Characterization and organelle genome sequencing of Pyropia species from Myanmar.Scientific reports · 2023Article
- Complete Mitogenome Sequencing, Annotation, and Phylogeny ofLife (Basel, Switzerland) · 2023Article
- Origin of minicircular mitochondrial genomes in red algae.Nature communications · 2023Article
- The complete mitochondrial genome of a wild-collectedMitochondrial DNA. Part B, Resources · 2023Article
- Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes.Genome biology and evolution · 2022Article
- The organellar genomes of Silvetia siliquosa (Fucales, Phaeophyceae) and comparative analyses of the brown algae.PloS one · 2022Article
- The Unicellular Red Alga Cyanidioschyzon merolae-The Simplest Model of a Photosynthetic Eukaryote.Plant & cell physiology · 2021Review
- Mitochondrial Genome Evolution in Pelagophyte Algae.Genome biology and evolution · 2021Article
- Organelle Genome Variation in the Red Algal GenusFrontiers in genetics · 2021Article
- OGDA: a comprehensive organelle genome database for algae.Database : the journal of biological databases and curation · 2020Article
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Authors and funding
13 authors at 8 institutions in 4 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Two red algal classes, the Florideophyceae (approximately 7,100 spp.) and Bangiophyceae (approximately 193 spp.), comprise 98% of red algal diversity in marine and freshwater habitats. These two classes form well-supported monophyletic groups in most phylogenetic analyses. Nonetheless, the interordinal relationships remain largely unresolved, in particular in the largest subclass Rhodymeniophycidae that includes 70% of all species. To elucidate red algal phylogenetic relationships and study organelle evolution, we determined the sequence of 11 mitochondrial genomes (mtDNA) from 5 florideophycean subclasses. These mtDNAs were combined with existing data, resulting in a database of 25 florideophytes and 12 bangiophytes (including cyanidiophycean species). A concatenated alignment of mt proteins was used to resolve ordinal relationships in the Rhodymeniophycidae. Red algal mtDNA genome comparisons showed 47 instances of gene rearrangement including 12 that distinguish Bangiophyceae from Hildenbrandiophycidae, and 5 that distinguish Hildenbrandiophycidae from Nemaliophycidae. These organelle data support a rapid radiation and surprisingly high conservation of mtDNA gene syntheny among the morphologically divergent multicellular lineages of Rhodymeniophycidae. In contrast, we find extensive mitochondrial gene rearrangements when comparing Bangiophyceae and Florideophyceae and multiple examples of gene loss among the different red algal lineages.
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