Evidence map›Paper›PMID 26244523›Full record

ArticleScientific reports2015

Localization of a bacterial group II intron-encoded protein in human cells.

Mercedes Reinoso-Colacio, Fernando Manuel García-Rodríguez, Marta García-Cañadas, Suyapa Amador-Cubero, José Luis García Pérez, Nicolás Toro

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Functionality ofFrontiers in molecular biosciences · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Mercedes Reinoso-ColacioGrupo de Ecología Genética, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Calle Profesor Albareda 1, 18008 Granada, Spain.
Fernando Manuel García-RodríguezGrupo de Ecología Genética, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Calle Profesor Albareda 1, 18008 Granada, Spain.
Marta García-CañadasGENYO (Centro Pfizer-Universidad de Granada-Junta de Andalucía de Genómica e Investigación Oncológica), PTS Granada, Avda. de la Ilustración 114 18016 Granada, Spain.
Suyapa Amador-CuberoGENYO (Centro Pfizer-Universidad de Granada-Junta de Andalucía de Genómica e Investigación Oncológica), PTS Granada, Avda. de la Ilustración 114 18016 Granada, Spain.
José Luis García PérezGENYO (Centro Pfizer-Universidad de Granada-Junta de Andalucía de Genómica e Investigación Oncológica), PTS Granada, Avda. de la Ilustración 114 18016 Granada, Spain.
Nicolás ToroGrupo de Ecología Genética, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, Calle Profesor Albareda 1, 18008 Granada, Spain.
Pfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research · ESEstación Experimental del Zaidín · ESConsejo Superior de Investigaciones Científicas · ES

Funding

Howard Hughes Medical Institute IECS-55007420
6 · The paper itself

Abstract

Group II introns are mobile retroelements that self-splice from precursor RNAs to form ribonucleoparticles (RNP), which can invade new specific genomic DNA sites. This specificity can be reprogrammed, for insertion into any desired DNA site, making these introns useful tools for bacterial genetic engineering. However, previous studies have suggested that these elements may function inefficiently in eukaryotes. We investigated the subcellular distribution, in cultured human cells, of the protein encoded by the group II intron RmInt1 (IEP) and several mutants. We created fusions with yellow fluorescent protein (YFP) and with a FLAG epitope. We found that the IEP was localized in the nucleus and nucleolus of the cells. Remarkably, it also accumulated at the periphery of the nuclear matrix. We were also able to identify spliced lariat intron RNA, which co-immunoprecipitated with the IEP, suggesting that functional RmInt1 RNPs can be assembled in cultured human cells.

Indexed as

Active Transport, Cell NucleusAnimalsBacterial ProteinsChlorocebus aethiopsCOS CellsHeLa CellsHumansIntronsLuminescent ProteinsNuclear ProteinsRecombinant Fusion ProteinsRibonucleoproteinsRNA SplicingBacterial ProteinsLuminescent ProteinsNuclear ProteinsRecombinant Fusion ProteinsRibonucleoproteinsyellow fluorescent protein, Bacteria

Identifiers

PMID26244523
PMCPMC4525487
OpenAlexW2416984590

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.